Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
YIPF1Q9Y548 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
YIPF1Q9Y548 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.23■□□□□ 0.51
YIPF1Q9Y548 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
YIPF1Q9Y548 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.23■□□□□ 0.51
YIPF1Q9Y548 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
YIPF1Q9Y548 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
YIPF1Q9Y548 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
YIPF1Q9Y548 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.23■□□□□ 0.51
YIPF1Q9Y548 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
YIPF1Q9Y548 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
YIPF1Q9Y548 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
YIPF1Q9Y548 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
YIPF1Q9Y548 AL590787.1-201ENST00000568856 1315 ntBASIC18.23■□□□□ 0.51
YIPF1Q9Y548 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
YIPF1Q9Y548 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
YIPF1Q9Y548 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
YIPF1Q9Y548 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
YIPF1Q9Y548 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
YIPF1Q9Y548 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
YIPF1Q9Y548 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
YIPF1Q9Y548 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
YIPF1Q9Y548 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
YIPF1Q9Y548 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.22■□□□□ 0.51
YIPF1Q9Y548 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.22■□□□□ 0.51
YIPF1Q9Y548 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.22■□□□□ 0.51
YIPF1Q9Y548 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.22■□□□□ 0.51
YIPF1Q9Y548 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
YIPF1Q9Y548 PI4KAP1-204ENST00000612579 1703 ntBASIC18.22■□□□□ 0.51
YIPF1Q9Y548 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
YIPF1Q9Y548 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.22■□□□□ 0.51
YIPF1Q9Y548 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
YIPF1Q9Y548 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
YIPF1Q9Y548 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.21■□□□□ 0.51
YIPF1Q9Y548 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.21■□□□□ 0.51
YIPF1Q9Y548 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
YIPF1Q9Y548 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
YIPF1Q9Y548 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
YIPF1Q9Y548 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
YIPF1Q9Y548 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.21■□□□□ 0.51
YIPF1Q9Y548 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
YIPF1Q9Y548 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.21■□□□□ 0.51
YIPF1Q9Y548 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
YIPF1Q9Y548 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
YIPF1Q9Y548 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.21■□□□□ 0.51
YIPF1Q9Y548 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
YIPF1Q9Y548 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
YIPF1Q9Y548 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
YIPF1Q9Y548 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
YIPF1Q9Y548 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
YIPF1Q9Y548 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.21■□□□□ 0.51
YIPF1Q9Y548 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.21■□□□□ 0.51
YIPF1Q9Y548 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.21■□□□□ 0.51
YIPF1Q9Y548 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
YIPF1Q9Y548 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.21■□□□□ 0.51
YIPF1Q9Y548 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.21■□□□□ 0.51
YIPF1Q9Y548 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
YIPF1Q9Y548 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.21■□□□□ 0.51
YIPF1Q9Y548 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
YIPF1Q9Y548 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
YIPF1Q9Y548 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.21■□□□□ 0.51
YIPF1Q9Y548 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
YIPF1Q9Y548 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
YIPF1Q9Y548 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
YIPF1Q9Y548 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
YIPF1Q9Y548 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
YIPF1Q9Y548 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.21■□□□□ 0.51
YIPF1Q9Y548 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
YIPF1Q9Y548 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
YIPF1Q9Y548 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
YIPF1Q9Y548 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
YIPF1Q9Y548 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
YIPF1Q9Y548 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
YIPF1Q9Y548 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.2■□□□□ 0.5
YIPF1Q9Y548 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
YIPF1Q9Y548 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
YIPF1Q9Y548 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
YIPF1Q9Y548 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
YIPF1Q9Y548 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.2■□□□□ 0.5
YIPF1Q9Y548 AC096734.2-201ENST00000562054 433 ntBASIC18.2■□□□□ 0.5
YIPF1Q9Y548 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.2■□□□□ 0.5
YIPF1Q9Y548 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
YIPF1Q9Y548 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
YIPF1Q9Y548 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
YIPF1Q9Y548 LINC01451-201ENST00000623792 534 ntBASIC18.2■□□□□ 0.5
YIPF1Q9Y548 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
YIPF1Q9Y548 AC079781.4-201ENST00000641908 219 ntBASIC18.2■□□□□ 0.5
YIPF1Q9Y548 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
YIPF1Q9Y548 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
YIPF1Q9Y548 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
YIPF1Q9Y548 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
YIPF1Q9Y548 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.2■□□□□ 0.5
YIPF1Q9Y548 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
YIPF1Q9Y548 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
YIPF1Q9Y548 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
YIPF1Q9Y548 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
YIPF1Q9Y548 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.19■□□□□ 0.5
YIPF1Q9Y548 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
YIPF1Q9Y548 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
YIPF1Q9Y548 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms