Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 OR2A1-AS1-201ENST00000462305 773 ntBASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 C1QL1P1-201ENST00000568105 661 ntBASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 MYB-201ENST00000316528 3571 ntTSL 5 BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 MYB-241ENST00000616088 3573 ntTSL 5 BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 CA12-203ENST00000422263 2556 ntTSL 2 BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 LINC02199-201ENST00000506655 2702 ntBASIC4.74□□□□□ -1.65
LCE3DQ9BYE3 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 AC022898.2-201ENST00000616822 1312 ntBASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 ABR-205ENST00000544583 5595 ntTSL 2 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms