Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
SLC46A1Q96NT5 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.72■□□□□ 0.27
SLC46A1Q96NT5 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SLC46A1Q96NT5 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC46A1Q96NT5 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC46A1Q96NT5 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.72■□□□□ 0.27
SLC46A1Q96NT5 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC46A1Q96NT5 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC46A1Q96NT5 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.72■□□□□ 0.27
SLC46A1Q96NT5 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC46A1Q96NT5 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC46A1Q96NT5 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC46A1Q96NT5 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC46A1Q96NT5 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC46A1Q96NT5 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC46A1Q96NT5 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
SLC46A1Q96NT5 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC46A1Q96NT5 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.72■□□□□ 0.27
SLC46A1Q96NT5 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.72■□□□□ 0.27
SLC46A1Q96NT5 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC46A1Q96NT5 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.72■□□□□ 0.27
SLC46A1Q96NT5 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC46A1Q96NT5 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC46A1Q96NT5 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.72■□□□□ 0.27
SLC46A1Q96NT5 ELK2BP-201ENST00000415014 1224 ntBASIC16.72■□□□□ 0.27
SLC46A1Q96NT5 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
SLC46A1Q96NT5 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.72■□□□□ 0.27
SLC46A1Q96NT5 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.72■□□□□ 0.27
SLC46A1Q96NT5 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.72■□□□□ 0.27
SLC46A1Q96NT5 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.72■□□□□ 0.27
SLC46A1Q96NT5 AC018845.2-201ENST00000568326 409 ntBASIC16.72■□□□□ 0.27
SLC46A1Q96NT5 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.72■□□□□ 0.27
SLC46A1Q96NT5 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.72■□□□□ 0.27
SLC46A1Q96NT5 AC008667.4-201ENST00000607370 168 ntBASIC16.72■□□□□ 0.27
SLC46A1Q96NT5 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.72■□□□□ 0.27
SLC46A1Q96NT5 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC46A1Q96NT5 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SLC46A1Q96NT5 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC46A1Q96NT5 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SLC46A1Q96NT5 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC46A1Q96NT5 ELL2P1-201ENST00000413990 1906 ntBASIC16.72■□□□□ 0.27
SLC46A1Q96NT5 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC46A1Q96NT5 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC46A1Q96NT5 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC46A1Q96NT5 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC46A1Q96NT5 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.71■□□□□ 0.27
SLC46A1Q96NT5 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.71■□□□□ 0.27
SLC46A1Q96NT5 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SLC46A1Q96NT5 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC46A1Q96NT5 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC46A1Q96NT5 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
SLC46A1Q96NT5 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC46A1Q96NT5 NCF1C-201ENST00000438382 1427 ntBASIC16.71■□□□□ 0.27
SLC46A1Q96NT5 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
SLC46A1Q96NT5 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC46A1Q96NT5 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC46A1Q96NT5 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.71■□□□□ 0.27
SLC46A1Q96NT5 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC46A1Q96NT5 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.71■□□□□ 0.27
SLC46A1Q96NT5 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
SLC46A1Q96NT5 AC090340.1-201ENST00000620778 4980 ntBASIC16.71■□□□□ 0.27
SLC46A1Q96NT5 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC46A1Q96NT5 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
SLC46A1Q96NT5 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
SLC46A1Q96NT5 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SLC46A1Q96NT5 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC46A1Q96NT5 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC46A1Q96NT5 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.71■□□□□ 0.27
SLC46A1Q96NT5 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.71■□□□□ 0.27
SLC46A1Q96NT5 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.71■□□□□ 0.27
SLC46A1Q96NT5 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
SLC46A1Q96NT5 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.71■□□□□ 0.27
SLC46A1Q96NT5 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.71■□□□□ 0.27
SLC46A1Q96NT5 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.71■□□□□ 0.27
SLC46A1Q96NT5 AL513190.1-201ENST00000621254 727 ntBASIC16.71■□□□□ 0.27
SLC46A1Q96NT5 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC46A1Q96NT5 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC46A1Q96NT5 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.71■□□□□ 0.27
SLC46A1Q96NT5 AL353593.2-201ENST00000602529 1483 ntBASIC16.71■□□□□ 0.27
SLC46A1Q96NT5 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC46A1Q96NT5 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC46A1Q96NT5 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC46A1Q96NT5 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC46A1Q96NT5 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC46A1Q96NT5 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.71■□□□□ 0.27
SLC46A1Q96NT5 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC46A1Q96NT5 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC46A1Q96NT5 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC46A1Q96NT5 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC46A1Q96NT5 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC46A1Q96NT5 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.71■□□□□ 0.27
SLC46A1Q96NT5 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC46A1Q96NT5 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC46A1Q96NT5 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.26
SLC46A1Q96NT5 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC46A1Q96NT5 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
SLC46A1Q96NT5 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC46A1Q96NT5 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SLC46A1Q96NT5 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.7■□□□□ 0.26
SLC46A1Q96NT5 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms