Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CFAP54Q96N23 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CFAP54Q96N23 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.03■□□□□ 0.32
CFAP54Q96N23 MYCLP1-201ENST00000372451 1075 ntBASIC17.02■□□□□ 0.32
CFAP54Q96N23 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.02■□□□□ 0.32
CFAP54Q96N23 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.02■□□□□ 0.32
CFAP54Q96N23 SPDYE7P-202ENST00000420373 878 ntBASIC17.02■□□□□ 0.32
CFAP54Q96N23 TSSK5P-201ENST00000423978 907 ntBASIC17.02■□□□□ 0.32
CFAP54Q96N23 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.02■□□□□ 0.32
CFAP54Q96N23 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CFAP54Q96N23 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CFAP54Q96N23 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CFAP54Q96N23 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.02■□□□□ 0.32
CFAP54Q96N23 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.02■□□□□ 0.32
CFAP54Q96N23 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.02■□□□□ 0.32
CFAP54Q96N23 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.02■□□□□ 0.32
CFAP54Q96N23 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CFAP54Q96N23 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.02■□□□□ 0.32
CFAP54Q96N23 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CFAP54Q96N23 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC17.02■□□□□ 0.32
CFAP54Q96N23 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CFAP54Q96N23 SPDYE14P-201ENST00000442619 822 ntBASIC17.02■□□□□ 0.32
CFAP54Q96N23 RN7SL589P-201ENST00000481268 310 ntBASIC17.02■□□□□ 0.32
CFAP54Q96N23 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CFAP54Q96N23 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CFAP54Q96N23 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC17.02■□□□□ 0.32
CFAP54Q96N23 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CFAP54Q96N23 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CFAP54Q96N23 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CFAP54Q96N23 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
CFAP54Q96N23 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.02■□□□□ 0.31
CFAP54Q96N23 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.02■□□□□ 0.31
CFAP54Q96N23 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CFAP54Q96N23 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CFAP54Q96N23 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.31
CFAP54Q96N23 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CFAP54Q96N23 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CFAP54Q96N23 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CFAP54Q96N23 SNX29P1-201ENST00000548357 1007 ntBASIC17.02■□□□□ 0.31
CFAP54Q96N23 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.02■□□□□ 0.31
CFAP54Q96N23 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.31
CFAP54Q96N23 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.02■□□□□ 0.31
CFAP54Q96N23 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.02■□□□□ 0.31
CFAP54Q96N23 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CFAP54Q96N23 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CFAP54Q96N23 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CFAP54Q96N23 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CFAP54Q96N23 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.01■□□□□ 0.31
CFAP54Q96N23 AC100757.3-201ENST00000622361 1406 ntBASIC17.01■□□□□ 0.31
CFAP54Q96N23 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.01■□□□□ 0.31
CFAP54Q96N23 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CFAP54Q96N23 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CFAP54Q96N23 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CFAP54Q96N23 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CFAP54Q96N23 AC007064.4-201ENST00000637740 555 ntBASIC17.01■□□□□ 0.31
CFAP54Q96N23 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.01■□□□□ 0.31
CFAP54Q96N23 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CFAP54Q96N23 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CFAP54Q96N23 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CFAP54Q96N23 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CFAP54Q96N23 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.01■□□□□ 0.31
CFAP54Q96N23 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CFAP54Q96N23 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CFAP54Q96N23 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CFAP54Q96N23 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CFAP54Q96N23 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.01■□□□□ 0.31
CFAP54Q96N23 MIR4259-201ENST00000584466 101 ntBASIC17.01■□□□□ 0.31
CFAP54Q96N23 AL109936.8-201ENST00000641772 604 ntBASIC17.01■□□□□ 0.31
CFAP54Q96N23 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
CFAP54Q96N23 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CFAP54Q96N23 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17■□□□□ 0.31
CFAP54Q96N23 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17■□□□□ 0.31
CFAP54Q96N23 IGHV3-42-201ENST00000520410 361 ntBASIC17■□□□□ 0.31
CFAP54Q96N23 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CFAP54Q96N23 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CFAP54Q96N23 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC17■□□□□ 0.31
CFAP54Q96N23 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CFAP54Q96N23 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17■□□□□ 0.31
CFAP54Q96N23 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CFAP54Q96N23 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CFAP54Q96N23 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CFAP54Q96N23 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17■□□□□ 0.31
CFAP54Q96N23 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CFAP54Q96N23 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17■□□□□ 0.31
CFAP54Q96N23 MXI1-205ENST00000393134 889 ntTSL 2 BASIC17■□□□□ 0.31
CFAP54Q96N23 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC17■□□□□ 0.31
CFAP54Q96N23 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC17■□□□□ 0.31
CFAP54Q96N23 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17■□□□□ 0.31
CFAP54Q96N23 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CFAP54Q96N23 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CFAP54Q96N23 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CFAP54Q96N23 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
CFAP54Q96N23 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CFAP54Q96N23 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17■□□□□ 0.31
CFAP54Q96N23 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CFAP54Q96N23 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17■□□□□ 0.31
CFAP54Q96N23 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC17■□□□□ 0.31
CFAP54Q96N23 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17■□□□□ 0.31
CFAP54Q96N23 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CFAP54Q96N23 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms