Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PTP4A1Q93096 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC15.77■□□□□ 0.11
PTP4A1Q93096 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.77■□□□□ 0.11
PTP4A1Q93096 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.11
PTP4A1Q93096 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
PTP4A1Q93096 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PTP4A1Q93096 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.77■□□□□ 0.11
PTP4A1Q93096 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PTP4A1Q93096 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
PTP4A1Q93096 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.77■□□□□ 0.11
PTP4A1Q93096 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.77■□□□□ 0.11
PTP4A1Q93096 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PTP4A1Q93096 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTP4A1Q93096 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTP4A1Q93096 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
PTP4A1Q93096 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTP4A1Q93096 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
PTP4A1Q93096 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
PTP4A1Q93096 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PTP4A1Q93096 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTP4A1Q93096 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PTP4A1Q93096 AC068472.1-201ENST00000474589 881 ntBASIC15.76■□□□□ 0.11
PTP4A1Q93096 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC15.76■□□□□ 0.11
PTP4A1Q93096 KRT18P21-201ENST00000515767 1272 ntBASIC15.76■□□□□ 0.11
PTP4A1Q93096 LINC01238-205ENST00000567549 1107 ntBASIC15.76■□□□□ 0.11
PTP4A1Q93096 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PTP4A1Q93096 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTP4A1Q93096 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
PTP4A1Q93096 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.76■□□□□ 0.11
PTP4A1Q93096 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTP4A1Q93096 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.76■□□□□ 0.11
PTP4A1Q93096 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.76■□□□□ 0.11
PTP4A1Q93096 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.76■□□□□ 0.11
PTP4A1Q93096 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTP4A1Q93096 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTP4A1Q93096 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
PTP4A1Q93096 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.76■□□□□ 0.11
PTP4A1Q93096 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTP4A1Q93096 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTP4A1Q93096 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
PTP4A1Q93096 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTP4A1Q93096 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PTP4A1Q93096 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.76■□□□□ 0.11
PTP4A1Q93096 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTP4A1Q93096 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.76■□□□□ 0.11
PTP4A1Q93096 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTP4A1Q93096 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
PTP4A1Q93096 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTP4A1Q93096 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTP4A1Q93096 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.76■□□□□ 0.11
PTP4A1Q93096 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTP4A1Q93096 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
PTP4A1Q93096 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTP4A1Q93096 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTP4A1Q93096 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PTP4A1Q93096 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PTP4A1Q93096 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTP4A1Q93096 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.75■□□□□ 0.11
PTP4A1Q93096 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTP4A1Q93096 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTP4A1Q93096 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
PTP4A1Q93096 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
PTP4A1Q93096 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTP4A1Q93096 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTP4A1Q93096 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTP4A1Q93096 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PTP4A1Q93096 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.75■□□□□ 0.11
PTP4A1Q93096 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
PTP4A1Q93096 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PTP4A1Q93096 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTP4A1Q93096 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PTP4A1Q93096 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTP4A1Q93096 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTP4A1Q93096 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC15.75■□□□□ 0.11
PTP4A1Q93096 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTP4A1Q93096 FAM210CP-201ENST00000445714 574 ntBASIC15.75■□□□□ 0.11
PTP4A1Q93096 MTCL1P1-201ENST00000446207 792 ntBASIC15.75■□□□□ 0.11
PTP4A1Q93096 AC092647.4-201ENST00000457211 535 ntBASIC15.75■□□□□ 0.11
PTP4A1Q93096 SNX5-210ENST00000481323 562 ntTSL 3 BASIC15.75■□□□□ 0.11
PTP4A1Q93096 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC15.75■□□□□ 0.11
PTP4A1Q93096 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC15.75■□□□□ 0.11
PTP4A1Q93096 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC15.75■□□□□ 0.11
PTP4A1Q93096 AL139327.4-201ENST00000612362 153 ntBASIC15.75■□□□□ 0.11
PTP4A1Q93096 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.75■□□□□ 0.11
PTP4A1Q93096 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.75■□□□□ 0.11
PTP4A1Q93096 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.75■□□□□ 0.11
PTP4A1Q93096 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC15.75■□□□□ 0.11
PTP4A1Q93096 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTP4A1Q93096 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTP4A1Q93096 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTP4A1Q93096 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PTP4A1Q93096 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
PTP4A1Q93096 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.75■□□□□ 0.11
PTP4A1Q93096 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTP4A1Q93096 UBALD1-205ENST00000590891 2641 ntBASIC15.75■□□□□ 0.11
PTP4A1Q93096 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
PTP4A1Q93096 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PTP4A1Q93096 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.75■□□□□ 0.11
PTP4A1Q93096 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
PTP4A1Q93096 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms