Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.16■□□□□ 0.5
SH3RF2Q8TEC5 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SH3RF2Q8TEC5 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SH3RF2Q8TEC5 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.16■□□□□ 0.5
SH3RF2Q8TEC5 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.16■□□□□ 0.5
SH3RF2Q8TEC5 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.16■□□□□ 0.5
SH3RF2Q8TEC5 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.16■□□□□ 0.5
SH3RF2Q8TEC5 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
SH3RF2Q8TEC5 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SH3RF2Q8TEC5 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SH3RF2Q8TEC5 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SH3RF2Q8TEC5 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SH3RF2Q8TEC5 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SH3RF2Q8TEC5 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.16■□□□□ 0.5
SH3RF2Q8TEC5 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
SH3RF2Q8TEC5 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SH3RF2Q8TEC5 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.15■□□□□ 0.5
SH3RF2Q8TEC5 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SH3RF2Q8TEC5 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.15■□□□□ 0.5
SH3RF2Q8TEC5 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.15■□□□□ 0.5
SH3RF2Q8TEC5 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SH3RF2Q8TEC5 NCF1C-201ENST00000438382 1427 ntBASIC18.15■□□□□ 0.5
SH3RF2Q8TEC5 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
SH3RF2Q8TEC5 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SH3RF2Q8TEC5 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SH3RF2Q8TEC5 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SH3RF2Q8TEC5 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SH3RF2Q8TEC5 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SH3RF2Q8TEC5 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SH3RF2Q8TEC5 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SH3RF2Q8TEC5 AC008764.6-201ENST00000595909 2069 ntBASIC18.15■□□□□ 0.5
SH3RF2Q8TEC5 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SH3RF2Q8TEC5 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.15■□□□□ 0.5
SH3RF2Q8TEC5 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.15■□□□□ 0.5
SH3RF2Q8TEC5 AC108751.1-201ENST00000490852 363 ntBASIC18.15■□□□□ 0.5
SH3RF2Q8TEC5 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.15■□□□□ 0.5
SH3RF2Q8TEC5 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.15■□□□□ 0.5
SH3RF2Q8TEC5 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.15■□□□□ 0.5
SH3RF2Q8TEC5 AL139424.1-201ENST00000607572 797 ntBASIC18.15■□□□□ 0.5
SH3RF2Q8TEC5 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SH3RF2Q8TEC5 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.15■□□□□ 0.5
SH3RF2Q8TEC5 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.15■□□□□ 0.5
SH3RF2Q8TEC5 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SH3RF2Q8TEC5 AC006504.4-201ENST00000592118 1568 ntBASIC18.15■□□□□ 0.5
SH3RF2Q8TEC5 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SH3RF2Q8TEC5 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.15■□□□□ 0.5
SH3RF2Q8TEC5 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SH3RF2Q8TEC5 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SH3RF2Q8TEC5 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SH3RF2Q8TEC5 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SH3RF2Q8TEC5 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SH3RF2Q8TEC5 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.15■□□□□ 0.5
SH3RF2Q8TEC5 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.15■□□□□ 0.5
SH3RF2Q8TEC5 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SH3RF2Q8TEC5 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SH3RF2Q8TEC5 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SH3RF2Q8TEC5 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.15■□□□□ 0.5
SH3RF2Q8TEC5 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SH3RF2Q8TEC5 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SH3RF2Q8TEC5 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.15■□□□□ 0.5
SH3RF2Q8TEC5 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.14■□□□□ 0.5
SH3RF2Q8TEC5 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SH3RF2Q8TEC5 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
SH3RF2Q8TEC5 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
SH3RF2Q8TEC5 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.14■□□□□ 0.5
SH3RF2Q8TEC5 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.14■□□□□ 0.5
SH3RF2Q8TEC5 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SH3RF2Q8TEC5 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.14■□□□□ 0.49
SH3RF2Q8TEC5 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SH3RF2Q8TEC5 FLJ13224-201ENST00000313737 1514 ntBASIC18.14■□□□□ 0.49
SH3RF2Q8TEC5 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SH3RF2Q8TEC5 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.14■□□□□ 0.49
SH3RF2Q8TEC5 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.14■□□□□ 0.49
SH3RF2Q8TEC5 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SH3RF2Q8TEC5 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SH3RF2Q8TEC5 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SH3RF2Q8TEC5 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SH3RF2Q8TEC5 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.14■□□□□ 0.49
SH3RF2Q8TEC5 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.14■□□□□ 0.49
SH3RF2Q8TEC5 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.14■□□□□ 0.49
SH3RF2Q8TEC5 RNA5SP416-201ENST00000516838 111 ntBASIC18.14■□□□□ 0.49
SH3RF2Q8TEC5 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SH3RF2Q8TEC5 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
SH3RF2Q8TEC5 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.14■□□□□ 0.49
SH3RF2Q8TEC5 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SH3RF2Q8TEC5 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SH3RF2Q8TEC5 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SH3RF2Q8TEC5 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.14■□□□□ 0.49
SH3RF2Q8TEC5 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SH3RF2Q8TEC5 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.14■□□□□ 0.49
SH3RF2Q8TEC5 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SH3RF2Q8TEC5 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SH3RF2Q8TEC5 KRT18P55-202ENST00000578578 1546 ntBASIC18.13■□□□□ 0.49
SH3RF2Q8TEC5 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SH3RF2Q8TEC5 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SH3RF2Q8TEC5 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SH3RF2Q8TEC5 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SH3RF2Q8TEC5 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
SH3RF2Q8TEC5 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SH3RF2Q8TEC5 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 143.7 ms