Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 SIGLEC30P-201ENST00000455569 941 ntBASIC18.49■□□□□ 0.55
SCN4BQ8IWT1 AC002558.1-201ENST00000488906 803 ntBASIC18.49■□□□□ 0.55
SCN4BQ8IWT1 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.49■□□□□ 0.55
SCN4BQ8IWT1 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.49■□□□□ 0.55
SCN4BQ8IWT1 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.49■□□□□ 0.55
SCN4BQ8IWT1 STK25P1-201ENST00000585406 838 ntBASIC18.49■□□□□ 0.55
SCN4BQ8IWT1 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SCN4BQ8IWT1 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SCN4BQ8IWT1 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.49■□□□□ 0.55
SCN4BQ8IWT1 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.49■□□□□ 0.55
SCN4BQ8IWT1 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SCN4BQ8IWT1 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SCN4BQ8IWT1 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SCN4BQ8IWT1 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SCN4BQ8IWT1 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.49■□□□□ 0.55
SCN4BQ8IWT1 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SCN4BQ8IWT1 AL390961.4-201ENST00000623958 2535 ntBASIC18.49■□□□□ 0.55
SCN4BQ8IWT1 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SCN4BQ8IWT1 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SCN4BQ8IWT1 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.49■□□□□ 0.55
SCN4BQ8IWT1 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SCN4BQ8IWT1 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SCN4BQ8IWT1 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SCN4BQ8IWT1 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SCN4BQ8IWT1 AC012317.2-201ENST00000623305 2251 ntBASIC18.48■□□□□ 0.55
SCN4BQ8IWT1 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SCN4BQ8IWT1 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SCN4BQ8IWT1 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.48■□□□□ 0.55
SCN4BQ8IWT1 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
SCN4BQ8IWT1 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
SCN4BQ8IWT1 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SCN4BQ8IWT1 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.48■□□□□ 0.55
SCN4BQ8IWT1 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SCN4BQ8IWT1 AP002414.3-201ENST00000589352 1468 ntBASIC18.48■□□□□ 0.55
SCN4BQ8IWT1 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SCN4BQ8IWT1 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SCN4BQ8IWT1 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.48■□□□□ 0.55
SCN4BQ8IWT1 PRYP5-201ENST00000451909 266 ntBASIC18.48■□□□□ 0.55
SCN4BQ8IWT1 RPL13AP23-201ENST00000480739 586 ntBASIC18.48■□□□□ 0.55
SCN4BQ8IWT1 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.48■□□□□ 0.55
SCN4BQ8IWT1 AC105339.3-201ENST00000560043 636 ntBASIC18.48■□□□□ 0.55
SCN4BQ8IWT1 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
SCN4BQ8IWT1 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SCN4BQ8IWT1 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SCN4BQ8IWT1 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SCN4BQ8IWT1 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.48■□□□□ 0.55
SCN4BQ8IWT1 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.48■□□□□ 0.55
SCN4BQ8IWT1 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
SCN4BQ8IWT1 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.48■□□□□ 0.55
SCN4BQ8IWT1 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SCN4BQ8IWT1 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SCN4BQ8IWT1 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.48■□□□□ 0.55
SCN4BQ8IWT1 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SCN4BQ8IWT1 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SCN4BQ8IWT1 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SCN4BQ8IWT1 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.47■□□□□ 0.55
SCN4BQ8IWT1 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
SCN4BQ8IWT1 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.47■□□□□ 0.55
SCN4BQ8IWT1 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SCN4BQ8IWT1 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SCN4BQ8IWT1 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SCN4BQ8IWT1 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
SCN4BQ8IWT1 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SCN4BQ8IWT1 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
SCN4BQ8IWT1 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.47■□□□□ 0.55
SCN4BQ8IWT1 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SCN4BQ8IWT1 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.47■□□□□ 0.55
SCN4BQ8IWT1 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SCN4BQ8IWT1 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SCN4BQ8IWT1 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SCN4BQ8IWT1 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.47■□□□□ 0.55
SCN4BQ8IWT1 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SCN4BQ8IWT1 AC098831.1-202ENST00000438821 336 ntBASIC18.47■□□□□ 0.55
SCN4BQ8IWT1 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SCN4BQ8IWT1 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SCN4BQ8IWT1 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.47■□□□□ 0.55
SCN4BQ8IWT1 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.47■□□□□ 0.55
SCN4BQ8IWT1 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.47■□□□□ 0.55
SCN4BQ8IWT1 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.47■□□□□ 0.55
SCN4BQ8IWT1 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.47■□□□□ 0.55
SCN4BQ8IWT1 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SCN4BQ8IWT1 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SCN4BQ8IWT1 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.47■□□□□ 0.55
SCN4BQ8IWT1 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SCN4BQ8IWT1 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SCN4BQ8IWT1 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
SCN4BQ8IWT1 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SCN4BQ8IWT1 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SCN4BQ8IWT1 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.46■□□□□ 0.55
SCN4BQ8IWT1 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SCN4BQ8IWT1 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SCN4BQ8IWT1 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SCN4BQ8IWT1 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SCN4BQ8IWT1 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SCN4BQ8IWT1 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SCN4BQ8IWT1 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
SCN4BQ8IWT1 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.46■□□□□ 0.55
SCN4BQ8IWT1 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.46■□□□□ 0.55
SCN4BQ8IWT1 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.46■□□□□ 0.55
SCN4BQ8IWT1 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms