Protein–RNA interactions for Protein: Q6PCB7

SLC27A1, Long-chain fatty acid transport protein 1, humanhuman

Predictions only

Length 646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1Q6PCB7 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC27A1Q6PCB7 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SLC27A1Q6PCB7 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
SLC27A1Q6PCB7 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC27A1Q6PCB7 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
SLC27A1Q6PCB7 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC27A1Q6PCB7 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SLC27A1Q6PCB7 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC27A1Q6PCB7 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC27A1Q6PCB7 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC27A1Q6PCB7 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SLC27A1Q6PCB7 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SLC27A1Q6PCB7 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC27A1Q6PCB7 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SLC27A1Q6PCB7 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC27A1Q6PCB7 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.9■□□□□ 0.62
SLC27A1Q6PCB7 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
SLC27A1Q6PCB7 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC27A1Q6PCB7 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.9■□□□□ 0.62
SLC27A1Q6PCB7 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.9■□□□□ 0.62
SLC27A1Q6PCB7 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.9■□□□□ 0.62
SLC27A1Q6PCB7 KRT18P3-201ENST00000451602 1288 ntBASIC18.9■□□□□ 0.62
SLC27A1Q6PCB7 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC27A1Q6PCB7 PGAM5P1-201ENST00000518923 814 ntBASIC18.9■□□□□ 0.62
SLC27A1Q6PCB7 IGHV3-65-201ENST00000523210 341 ntBASIC18.9■□□□□ 0.62
SLC27A1Q6PCB7 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.9■□□□□ 0.62
SLC27A1Q6PCB7 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC27A1Q6PCB7 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.9■□□□□ 0.62
SLC27A1Q6PCB7 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.9■□□□□ 0.62
SLC27A1Q6PCB7 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
SLC27A1Q6PCB7 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
SLC27A1Q6PCB7 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SLC27A1Q6PCB7 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC27A1Q6PCB7 NOC2LP1-202ENST00000452600 2235 ntBASIC18.9■□□□□ 0.62
SLC27A1Q6PCB7 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC27A1Q6PCB7 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.9■□□□□ 0.62
SLC27A1Q6PCB7 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
SLC27A1Q6PCB7 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC27A1Q6PCB7 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC27A1Q6PCB7 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.9■□□□□ 0.62
SLC27A1Q6PCB7 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.62
SLC27A1Q6PCB7 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.62
SLC27A1Q6PCB7 AL355312.1-201ENST00000407115 2176 ntBASIC18.89■□□□□ 0.62
SLC27A1Q6PCB7 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
SLC27A1Q6PCB7 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC27A1Q6PCB7 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SLC27A1Q6PCB7 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
SLC27A1Q6PCB7 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.89■□□□□ 0.61
SLC27A1Q6PCB7 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SLC27A1Q6PCB7 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC27A1Q6PCB7 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
SLC27A1Q6PCB7 PTCHD3P3-201ENST00000403073 906 ntBASIC18.89■□□□□ 0.61
SLC27A1Q6PCB7 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC27A1Q6PCB7 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.89■□□□□ 0.61
SLC27A1Q6PCB7 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.89■□□□□ 0.61
SLC27A1Q6PCB7 AC007967.2-201ENST00000432613 625 ntBASIC18.89■□□□□ 0.61
SLC27A1Q6PCB7 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.89■□□□□ 0.61
SLC27A1Q6PCB7 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC27A1Q6PCB7 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
SLC27A1Q6PCB7 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
SLC27A1Q6PCB7 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.89■□□□□ 0.61
SLC27A1Q6PCB7 AC108073.2-201ENST00000464002 357 ntBASIC18.89■□□□□ 0.61
SLC27A1Q6PCB7 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.89■□□□□ 0.61
SLC27A1Q6PCB7 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.89■□□□□ 0.61
SLC27A1Q6PCB7 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.89■□□□□ 0.61
SLC27A1Q6PCB7 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC27A1Q6PCB7 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC27A1Q6PCB7 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SLC27A1Q6PCB7 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SLC27A1Q6PCB7 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC27A1Q6PCB7 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC27A1Q6PCB7 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.89■□□□□ 0.61
SLC27A1Q6PCB7 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC27A1Q6PCB7 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC27A1Q6PCB7 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC27A1Q6PCB7 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.89■□□□□ 0.61
SLC27A1Q6PCB7 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC27A1Q6PCB7 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC27A1Q6PCB7 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
SLC27A1Q6PCB7 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.89■□□□□ 0.61
SLC27A1Q6PCB7 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC27A1Q6PCB7 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.88■□□□□ 0.61
SLC27A1Q6PCB7 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.88■□□□□ 0.61
SLC27A1Q6PCB7 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SLC27A1Q6PCB7 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC27A1Q6PCB7 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC27A1Q6PCB7 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.88■□□□□ 0.61
SLC27A1Q6PCB7 AC008764.6-201ENST00000595909 2069 ntBASIC18.88■□□□□ 0.61
SLC27A1Q6PCB7 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC27A1Q6PCB7 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC27A1Q6PCB7 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.88■□□□□ 0.61
SLC27A1Q6PCB7 RNA5SP416-201ENST00000516838 111 ntBASIC18.88■□□□□ 0.61
SLC27A1Q6PCB7 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.88■□□□□ 0.61
SLC27A1Q6PCB7 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.88■□□□□ 0.61
SLC27A1Q6PCB7 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SLC27A1Q6PCB7 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.88■□□□□ 0.61
SLC27A1Q6PCB7 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SLC27A1Q6PCB7 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SLC27A1Q6PCB7 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.88■□□□□ 0.61
SLC27A1Q6PCB7 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms