Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SCN1BQ07699 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SCN1BQ07699 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SCN1BQ07699 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
SCN1BQ07699 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.67■□□□□ 0.1
SCN1BQ07699 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SCN1BQ07699 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.67■□□□□ 0.1
SCN1BQ07699 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SCN1BQ07699 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SCN1BQ07699 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SCN1BQ07699 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
SCN1BQ07699 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SCN1BQ07699 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC15.67■□□□□ 0.1
SCN1BQ07699 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC15.67■□□□□ 0.1
SCN1BQ07699 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
SCN1BQ07699 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SCN1BQ07699 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SCN1BQ07699 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SCN1BQ07699 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
SCN1BQ07699 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SCN1BQ07699 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SCN1BQ07699 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC15.67■□□□□ 0.1
SCN1BQ07699 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
SCN1BQ07699 MCCD1P1-208ENST00000445732 328 ntBASIC15.67■□□□□ 0.1
SCN1BQ07699 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SCN1BQ07699 KRT18P41-201ENST00000518924 1277 ntBASIC15.67■□□□□ 0.1
SCN1BQ07699 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC15.67■□□□□ 0.1
SCN1BQ07699 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC15.67■□□□□ 0.1
SCN1BQ07699 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC15.67■□□□□ 0.1
SCN1BQ07699 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC15.67■□□□□ 0.1
SCN1BQ07699 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SCN1BQ07699 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SCN1BQ07699 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SCN1BQ07699 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SCN1BQ07699 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SCN1BQ07699 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SCN1BQ07699 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SCN1BQ07699 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.67■□□□□ 0.1
SCN1BQ07699 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SCN1BQ07699 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SCN1BQ07699 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.67■□□□□ 0.1
SCN1BQ07699 GPAT2P1-201ENST00000444924 1672 ntBASIC15.67■□□□□ 0.1
SCN1BQ07699 AL109659.2-201ENST00000606809 1674 ntBASIC15.67■□□□□ 0.1
SCN1BQ07699 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SCN1BQ07699 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SCN1BQ07699 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCN1BQ07699 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCN1BQ07699 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SCN1BQ07699 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
SCN1BQ07699 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.66■□□□□ 0.1
SCN1BQ07699 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SCN1BQ07699 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.66■□□□□ 0.1
SCN1BQ07699 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SCN1BQ07699 AC096733.2-201ENST00000609937 1394 ntBASIC15.66■□□□□ 0.1
SCN1BQ07699 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.66■□□□□ 0.1
SCN1BQ07699 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC15.66■□□□□ 0.1
SCN1BQ07699 AL023284.2-201ENST00000405850 579 ntBASIC15.66■□□□□ 0.1
SCN1BQ07699 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC15.66■□□□□ 0.1
SCN1BQ07699 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC15.66■□□□□ 0.1
SCN1BQ07699 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
SCN1BQ07699 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.66■□□□□ 0.1
SCN1BQ07699 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCN1BQ07699 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCN1BQ07699 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SCN1BQ07699 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCN1BQ07699 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.66■□□□□ 0.1
SCN1BQ07699 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCN1BQ07699 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.66■□□□□ 0.1
SCN1BQ07699 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC15.66■□□□□ 0.1
SCN1BQ07699 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SCN1BQ07699 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC15.66■□□□□ 0.1
SCN1BQ07699 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.66■□□□□ 0.1
SCN1BQ07699 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SCN1BQ07699 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCN1BQ07699 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCN1BQ07699 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCN1BQ07699 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SCN1BQ07699 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
SCN1BQ07699 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SCN1BQ07699 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SCN1BQ07699 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SCN1BQ07699 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SCN1BQ07699 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
SCN1BQ07699 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SCN1BQ07699 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SCN1BQ07699 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SCN1BQ07699 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SCN1BQ07699 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC15.65■□□□□ 0.1
SCN1BQ07699 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SCN1BQ07699 MDFI-202ENST00000373050 809 ntTSL 2 BASIC15.65■□□□□ 0.1
SCN1BQ07699 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SCN1BQ07699 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC15.65■□□□□ 0.1
SCN1BQ07699 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC15.65■□□□□ 0.1
SCN1BQ07699 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC15.65■□□□□ 0.1
SCN1BQ07699 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC15.65■□□□□ 0.1
SCN1BQ07699 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC15.65■□□□□ 0.1
SCN1BQ07699 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC15.65■□□□□ 0.1
SCN1BQ07699 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC15.65■□□□□ 0.1
SCN1BQ07699 AP003071.4-201ENST00000562276 1284 ntBASIC15.65■□□□□ 0.1
SCN1BQ07699 TMEM191A-211ENST00000637163 1067 ntBASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms