Protein–RNA interactions for Protein: Q04323

UBXN1, UBX domain-containing protein 1, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1Q04323 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.22■□□□□ 0.67
UBXN1Q04323 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBXN1Q04323 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
UBXN1Q04323 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
UBXN1Q04323 AC116353.5-201ENST00000638148 1699 ntBASIC19.21■□□□□ 0.67
UBXN1Q04323 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
UBXN1Q04323 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBXN1Q04323 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.21■□□□□ 0.67
UBXN1Q04323 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBXN1Q04323 AL137013.1-201ENST00000432946 1228 ntBASIC19.21■□□□□ 0.67
UBXN1Q04323 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
UBXN1Q04323 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.21■□□□□ 0.67
UBXN1Q04323 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.21■□□□□ 0.67
UBXN1Q04323 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.21■□□□□ 0.67
UBXN1Q04323 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.21■□□□□ 0.67
UBXN1Q04323 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.21■□□□□ 0.67
UBXN1Q04323 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.21■□□□□ 0.67
UBXN1Q04323 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.21■□□□□ 0.67
UBXN1Q04323 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.21■□□□□ 0.67
UBXN1Q04323 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBXN1Q04323 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBXN1Q04323 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBXN1Q04323 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBXN1Q04323 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
UBXN1Q04323 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBXN1Q04323 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBXN1Q04323 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBXN1Q04323 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBXN1Q04323 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBXN1Q04323 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBXN1Q04323 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.2■□□□□ 0.66
UBXN1Q04323 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
UBXN1Q04323 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBXN1Q04323 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
UBXN1Q04323 AC113347.1-201ENST00000413321 391 ntBASIC19.2■□□□□ 0.66
UBXN1Q04323 AC096633.1-201ENST00000422446 749 ntBASIC19.2■□□□□ 0.66
UBXN1Q04323 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.2■□□□□ 0.66
UBXN1Q04323 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.2■□□□□ 0.66
UBXN1Q04323 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.2■□□□□ 0.66
UBXN1Q04323 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
UBXN1Q04323 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
UBXN1Q04323 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBXN1Q04323 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.2■□□□□ 0.66
UBXN1Q04323 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
UBXN1Q04323 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
UBXN1Q04323 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.2■□□□□ 0.66
UBXN1Q04323 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBXN1Q04323 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBXN1Q04323 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
UBXN1Q04323 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.2■□□□□ 0.66
UBXN1Q04323 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBXN1Q04323 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBXN1Q04323 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.2■□□□□ 0.66
UBXN1Q04323 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBXN1Q04323 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBXN1Q04323 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
UBXN1Q04323 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
UBXN1Q04323 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBXN1Q04323 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
UBXN1Q04323 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
UBXN1Q04323 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBXN1Q04323 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBXN1Q04323 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
UBXN1Q04323 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC19.19■□□□□ 0.66
UBXN1Q04323 TERF1P1-201ENST00000311003 1181 ntBASIC19.19■□□□□ 0.66
UBXN1Q04323 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBXN1Q04323 AC117947.1-201ENST00000427448 529 ntBASIC19.19■□□□□ 0.66
UBXN1Q04323 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.19■□□□□ 0.66
UBXN1Q04323 AL359075.1-203ENST00000462729 1002 ntBASIC19.19■□□□□ 0.66
UBXN1Q04323 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.19■□□□□ 0.66
UBXN1Q04323 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.19■□□□□ 0.66
UBXN1Q04323 AC005363.2-201ENST00000618631 242 ntBASIC19.19■□□□□ 0.66
UBXN1Q04323 AC133561.5-201ENST00000635547 218 ntBASIC19.19■□□□□ 0.66
UBXN1Q04323 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
UBXN1Q04323 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBXN1Q04323 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBXN1Q04323 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
UBXN1Q04323 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.19■□□□□ 0.66
UBXN1Q04323 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
UBXN1Q04323 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.19■□□□□ 0.66
UBXN1Q04323 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBXN1Q04323 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
UBXN1Q04323 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBXN1Q04323 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBXN1Q04323 CROCCP1-201ENST00000426910 5675 ntBASIC19.18■□□□□ 0.66
UBXN1Q04323 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBXN1Q04323 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.18■□□□□ 0.66
UBXN1Q04323 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
UBXN1Q04323 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBXN1Q04323 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBXN1Q04323 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
UBXN1Q04323 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.18■□□□□ 0.66
UBXN1Q04323 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBXN1Q04323 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBXN1Q04323 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC19.18■□□□□ 0.66
UBXN1Q04323 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.18■□□□□ 0.66
UBXN1Q04323 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
UBXN1Q04323 HBZP1-201ENST00000354915 429 ntBASIC19.18■□□□□ 0.66
UBXN1Q04323 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.18■□□□□ 0.66
UBXN1Q04323 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms