Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.34■□□□□ 0.53
CBX1P83916 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CBX1P83916 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CBX1P83916 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CBX1P83916 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CBX1P83916 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CBX1P83916 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CBX1P83916 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CBX1P83916 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CBX1P83916 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CBX1P83916 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CBX1P83916 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CBX1P83916 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC18.34■□□□□ 0.53
CBX1P83916 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CBX1P83916 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CBX1P83916 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.33■□□□□ 0.53
CBX1P83916 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC18.33■□□□□ 0.53
CBX1P83916 AC100803.2-201ENST00000562459 1963 ntBASIC18.33■□□□□ 0.53
CBX1P83916 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CBX1P83916 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
CBX1P83916 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CBX1P83916 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CBX1P83916 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.33■□□□□ 0.53
CBX1P83916 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.53
CBX1P83916 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC18.33■□□□□ 0.53
CBX1P83916 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.53
CBX1P83916 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CBX1P83916 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC18.33■□□□□ 0.53
CBX1P83916 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
CBX1P83916 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CBX1P83916 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CBX1P83916 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CBX1P83916 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CBX1P83916 AL136967.2-201ENST00000623968 743 ntBASIC18.33■□□□□ 0.52
CBX1P83916 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CBX1P83916 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CBX1P83916 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CBX1P83916 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CBX1P83916 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CBX1P83916 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CBX1P83916 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CBX1P83916 AC046185.3-201ENST00000623228 1824 ntBASIC18.33■□□□□ 0.52
CBX1P83916 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.32■□□□□ 0.52
CBX1P83916 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CBX1P83916 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CBX1P83916 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CBX1P83916 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CBX1P83916 HLA-DQB2-231ENST00000435145 2026 ntBASIC18.32■□□□□ 0.52
CBX1P83916 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CBX1P83916 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CBX1P83916 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CBX1P83916 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CBX1P83916 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CBX1P83916 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC18.32■□□□□ 0.52
CBX1P83916 KRT18P68-201ENST00000392293 1000 ntBASIC18.32■□□□□ 0.52
CBX1P83916 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
CBX1P83916 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.32■□□□□ 0.52
CBX1P83916 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.32■□□□□ 0.52
CBX1P83916 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.32■□□□□ 0.52
CBX1P83916 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CBX1P83916 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CBX1P83916 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC18.32■□□□□ 0.52
CBX1P83916 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CBX1P83916 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC18.32■□□□□ 0.52
CBX1P83916 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.32■□□□□ 0.52
CBX1P83916 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC18.32■□□□□ 0.52
CBX1P83916 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CBX1P83916 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CBX1P83916 GSN-206ENST00000394353 2311 ntTSL 2 BASIC18.32■□□□□ 0.52
CBX1P83916 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CBX1P83916 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CBX1P83916 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CBX1P83916 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC18.31■□□□□ 0.52
CBX1P83916 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CBX1P83916 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CBX1P83916 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CBX1P83916 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CBX1P83916 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC18.31■□□□□ 0.52
CBX1P83916 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CBX1P83916 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CBX1P83916 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
CBX1P83916 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CBX1P83916 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CBX1P83916 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CBX1P83916 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CBX1P83916 AC007686.3-201ENST00000619017 3487 ntBASIC18.31■□□□□ 0.52
CBX1P83916 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CBX1P83916 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC18.31■□□□□ 0.52
CBX1P83916 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.31■□□□□ 0.52
CBX1P83916 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CBX1P83916 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CBX1P83916 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CBX1P83916 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CBX1P83916 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
CBX1P83916 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC18.31■□□□□ 0.52
CBX1P83916 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC18.31■□□□□ 0.52
CBX1P83916 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
CBX1P83916 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CBX1P83916 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CBX1P83916 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms