Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SMPD1P17405 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SMPD1P17405 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.38■□□□□ 0.69
SMPD1P17405 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.38■□□□□ 0.69
SMPD1P17405 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMPD1P17405 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.38■□□□□ 0.69
SMPD1P17405 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMPD1P17405 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
SMPD1P17405 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMPD1P17405 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.38■□□□□ 0.69
SMPD1P17405 AC004461.1-201ENST00000412461 403 ntBASIC19.38■□□□□ 0.69
SMPD1P17405 TSEN15P1-201ENST00000423257 515 ntBASIC19.38■□□□□ 0.69
SMPD1P17405 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
SMPD1P17405 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.38■□□□□ 0.69
SMPD1P17405 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SMPD1P17405 SLC25A6P2-201ENST00000497974 877 ntBASIC19.38■□□□□ 0.69
SMPD1P17405 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SMPD1P17405 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.38■□□□□ 0.69
SMPD1P17405 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.38■□□□□ 0.69
SMPD1P17405 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SMPD1P17405 AC006116.8-202ENST00000587620 1550 ntBASIC19.38■□□□□ 0.69
SMPD1P17405 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
SMPD1P17405 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.38■□□□□ 0.69
SMPD1P17405 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMPD1P17405 AC009113.1-201ENST00000570267 2443 ntBASIC19.37■□□□□ 0.69
SMPD1P17405 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
SMPD1P17405 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMPD1P17405 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMPD1P17405 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
SMPD1P17405 AC138028.4-201ENST00000564984 1845 ntBASIC19.37■□□□□ 0.69
SMPD1P17405 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.37■□□□□ 0.69
SMPD1P17405 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
SMPD1P17405 AC004408.2-201ENST00000623613 2777 ntBASIC19.37■□□□□ 0.69
SMPD1P17405 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC19.37■□□□□ 0.69
SMPD1P17405 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SMPD1P17405 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.37■□□□□ 0.69
SMPD1P17405 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC19.37■□□□□ 0.69
SMPD1P17405 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC19.37■□□□□ 0.69
SMPD1P17405 AL513480.1-201ENST00000451731 511 ntBASIC19.37■□□□□ 0.69
SMPD1P17405 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SMPD1P17405 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.37■□□□□ 0.69
SMPD1P17405 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.37■□□□□ 0.69
SMPD1P17405 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.37■□□□□ 0.69
SMPD1P17405 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC19.37■□□□□ 0.69
SMPD1P17405 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMPD1P17405 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMPD1P17405 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMPD1P17405 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.37■□□□□ 0.69
SMPD1P17405 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMPD1P17405 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMPD1P17405 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMPD1P17405 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.37■□□□□ 0.69
SMPD1P17405 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMPD1P17405 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.36■□□□□ 0.69
SMPD1P17405 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
SMPD1P17405 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMPD1P17405 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
SMPD1P17405 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SMPD1P17405 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SMPD1P17405 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMPD1P17405 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.36■□□□□ 0.69
SMPD1P17405 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMPD1P17405 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SMPD1P17405 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.36■□□□□ 0.69
SMPD1P17405 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SMPD1P17405 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC19.36■□□□□ 0.69
SMPD1P17405 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.36■□□□□ 0.69
SMPD1P17405 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.36■□□□□ 0.69
SMPD1P17405 AC004835.2-201ENST00000603762 682 ntBASIC19.36■□□□□ 0.69
SMPD1P17405 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMPD1P17405 REXO1L3P-201ENST00000622202 1288 ntBASIC19.36■□□□□ 0.69
SMPD1P17405 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMPD1P17405 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SMPD1P17405 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.36■□□□□ 0.69
SMPD1P17405 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMPD1P17405 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SMPD1P17405 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SMPD1P17405 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.35■□□□□ 0.69
SMPD1P17405 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.35■□□□□ 0.69
SMPD1P17405 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMPD1P17405 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMPD1P17405 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.35■□□□□ 0.69
SMPD1P17405 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMPD1P17405 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMPD1P17405 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMPD1P17405 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.35■□□□□ 0.69
SMPD1P17405 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.35■□□□□ 0.69
SMPD1P17405 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.35■□□□□ 0.69
SMPD1P17405 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMPD1P17405 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMPD1P17405 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.35■□□□□ 0.69
SMPD1P17405 AL139327.4-201ENST00000612362 153 ntBASIC19.35■□□□□ 0.69
SMPD1P17405 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC19.35■□□□□ 0.69
SMPD1P17405 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.35■□□□□ 0.69
SMPD1P17405 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.35■□□□□ 0.69
SMPD1P17405 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.35■□□□□ 0.69
SMPD1P17405 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMPD1P17405 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMPD1P17405 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.35■□□□□ 0.69
SMPD1P17405 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms