Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.19■□□□□ 0.98
COL11A2P13942 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL11A2P13942 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC21.18■□□□□ 0.98
COL11A2P13942 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL11A2P13942 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
COL11A2P13942 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC21.18■□□□□ 0.98
COL11A2P13942 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
COL11A2P13942 INGX-202ENST00000489074 768 ntBASIC21.18■□□□□ 0.98
COL11A2P13942 IGHV3-42-201ENST00000520410 361 ntBASIC21.18■□□□□ 0.98
COL11A2P13942 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL11A2P13942 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC21.18■□□□□ 0.98
COL11A2P13942 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC21.18■□□□□ 0.98
COL11A2P13942 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC21.18■□□□□ 0.98
COL11A2P13942 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL11A2P13942 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL11A2P13942 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC21.18■□□□□ 0.98
COL11A2P13942 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC21.18■□□□□ 0.98
COL11A2P13942 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL11A2P13942 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
COL11A2P13942 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL11A2P13942 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC21.18■□□□□ 0.98
COL11A2P13942 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL11A2P13942 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.18■□□□□ 0.98
COL11A2P13942 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
COL11A2P13942 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL11A2P13942 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC21.18■□□□□ 0.98
COL11A2P13942 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC21.18■□□□□ 0.98
COL11A2P13942 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL11A2P13942 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
COL11A2P13942 NAA50-208ENST00000497255 789 ntTSL 5 BASIC21.18■□□□□ 0.98
COL11A2P13942 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
COL11A2P13942 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC21.18■□□□□ 0.98
COL11A2P13942 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
COL11A2P13942 COQ9-214ENST00000567933 882 ntTSL 3 BASIC21.18■□□□□ 0.98
COL11A2P13942 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC21.18■□□□□ 0.98
COL11A2P13942 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC21.18■□□□□ 0.98
COL11A2P13942 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC21.18■□□□□ 0.98
COL11A2P13942 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
COL11A2P13942 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
COL11A2P13942 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC21.17■□□□□ 0.98
COL11A2P13942 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COL11A2P13942 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COL11A2P13942 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
COL11A2P13942 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
COL11A2P13942 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COL11A2P13942 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COL11A2P13942 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC21.17■□□□□ 0.98
COL11A2P13942 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
COL11A2P13942 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC21.17■□□□□ 0.98
COL11A2P13942 GRAP-202ENST00000395635 834 ntTSL 2 BASIC21.17■□□□□ 0.98
COL11A2P13942 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC21.17■□□□□ 0.98
COL11A2P13942 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC21.17■□□□□ 0.98
COL11A2P13942 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC21.17■□□□□ 0.98
COL11A2P13942 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
COL11A2P13942 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC21.17■□□□□ 0.98
COL11A2P13942 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
COL11A2P13942 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
COL11A2P13942 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC21.17■□□□□ 0.98
COL11A2P13942 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COL11A2P13942 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL11A2P13942 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
COL11A2P13942 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL11A2P13942 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
COL11A2P13942 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC21.16■□□□□ 0.98
COL11A2P13942 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
COL11A2P13942 HMGA1P7-201ENST00000406908 502 ntBASIC21.16■□□□□ 0.98
COL11A2P13942 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC21.16■□□□□ 0.98
COL11A2P13942 SPDYE22P-201ENST00000582158 798 ntBASIC21.16■□□□□ 0.98
COL11A2P13942 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC21.16■□□□□ 0.98
COL11A2P13942 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
COL11A2P13942 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
COL11A2P13942 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL11A2P13942 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL11A2P13942 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
COL11A2P13942 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC21.16■□□□□ 0.98
COL11A2P13942 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC21.16■□□□□ 0.98
COL11A2P13942 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC21.16■□□□□ 0.98
COL11A2P13942 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC21.16■□□□□ 0.98
COL11A2P13942 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL11A2P13942 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL11A2P13942 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL11A2P13942 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COL11A2P13942 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL11A2P13942 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL11A2P13942 GOLGA6L11P-201ENST00000417252 1298 ntBASIC21.15■□□□□ 0.98
COL11A2P13942 AC004890.2-204ENST00000481968 304 ntBASIC21.15■□□□□ 0.98
COL11A2P13942 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC21.15■□□□□ 0.98
COL11A2P13942 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC21.15■□□□□ 0.98
COL11A2P13942 SERBP1P5-201ENST00000510079 1181 ntBASIC21.15■□□□□ 0.98
COL11A2P13942 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
COL11A2P13942 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC21.15■□□□□ 0.98
COL11A2P13942 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COL11A2P13942 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC21.15■□□□□ 0.98
COL11A2P13942 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC21.15■□□□□ 0.98
COL11A2P13942 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
COL11A2P13942 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
COL11A2P13942 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL11A2P13942 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
COL11A2P13942 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL11A2P13942 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms