Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RETP07949 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RETP07949 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RETP07949 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RETP07949 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.67■□□□□ 0.42
RETP07949 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
RETP07949 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RETP07949 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RETP07949 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.67■□□□□ 0.42
RETP07949 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RETP07949 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.67■□□□□ 0.42
RETP07949 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RETP07949 MTMR9LP-203ENST00000426597 1545 ntBASIC17.67■□□□□ 0.42
RETP07949 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RETP07949 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RETP07949 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RETP07949 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RETP07949 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RETP07949 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
RETP07949 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RETP07949 AC067852.2-201ENST00000590513 2313 ntBASIC17.66■□□□□ 0.42
RETP07949 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RETP07949 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RETP07949 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RETP07949 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RETP07949 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RETP07949 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
RETP07949 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RETP07949 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RETP07949 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.66■□□□□ 0.42
RETP07949 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
RETP07949 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.66■□□□□ 0.42
RETP07949 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.66■□□□□ 0.42
RETP07949 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RETP07949 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RETP07949 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.66■□□□□ 0.42
RETP07949 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.66■□□□□ 0.42
RETP07949 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.66■□□□□ 0.42
RETP07949 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.66■□□□□ 0.42
RETP07949 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.66■□□□□ 0.42
RETP07949 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RETP07949 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.66■□□□□ 0.42
RETP07949 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RETP07949 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.66■□□□□ 0.42
RETP07949 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RETP07949 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RETP07949 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.66■□□□□ 0.42
RETP07949 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RETP07949 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RETP07949 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.65■□□□□ 0.42
RETP07949 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RETP07949 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RETP07949 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RETP07949 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RETP07949 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RETP07949 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RETP07949 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RETP07949 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RETP07949 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RETP07949 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.65■□□□□ 0.42
RETP07949 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.65■□□□□ 0.42
RETP07949 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.65■□□□□ 0.42
RETP07949 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RETP07949 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RETP07949 VN2R19P-201ENST00000442399 1052 ntBASIC17.65■□□□□ 0.42
RETP07949 PAWRP1-201ENST00000451083 565 ntBASIC17.65■□□□□ 0.42
RETP07949 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.65■□□□□ 0.42
RETP07949 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.65■□□□□ 0.42
RETP07949 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.65■□□□□ 0.42
RETP07949 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RETP07949 AC093028.1-201ENST00000622998 982 ntBASIC17.65■□□□□ 0.42
RETP07949 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RETP07949 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RETP07949 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RETP07949 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.65■□□□□ 0.42
RETP07949 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RETP07949 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RETP07949 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RETP07949 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.64■□□□□ 0.42
RETP07949 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RETP07949 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RETP07949 LTB4R2-202ENST00000528054 3092 ntBASIC17.64■□□□□ 0.41
RETP07949 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RETP07949 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RETP07949 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RETP07949 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RETP07949 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RETP07949 TSEN15P1-201ENST00000423257 515 ntBASIC17.64■□□□□ 0.41
RETP07949 PRSS29P-201ENST00000440800 595 ntBASIC17.64■□□□□ 0.41
RETP07949 AC112698.1-201ENST00000510299 916 ntBASIC17.64■□□□□ 0.41
RETP07949 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.64■□□□□ 0.41
RETP07949 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.64■□□□□ 0.41
RETP07949 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.64■□□□□ 0.41
RETP07949 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.64■□□□□ 0.41
RETP07949 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.64■□□□□ 0.41
RETP07949 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.64■□□□□ 0.41
RETP07949 AC027612.4-201ENST00000605371 583 ntBASIC17.64■□□□□ 0.41
RETP07949 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RETP07949 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RETP07949 PMPCAP1-201ENST00000508114 1576 ntBASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms