Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC19.65■□□□□ 0.74
GGPS1O95749 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC19.65■□□□□ 0.74
GGPS1O95749 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
GGPS1O95749 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
GGPS1O95749 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.65■□□□□ 0.74
GGPS1O95749 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
GGPS1O95749 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GGPS1O95749 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
GGPS1O95749 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
GGPS1O95749 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
GGPS1O95749 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
GGPS1O95749 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
GGPS1O95749 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.64■□□□□ 0.73
GGPS1O95749 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.64■□□□□ 0.73
GGPS1O95749 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
GGPS1O95749 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
GGPS1O95749 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19.64■□□□□ 0.73
GGPS1O95749 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
GGPS1O95749 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC19.64■□□□□ 0.73
GGPS1O95749 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
GGPS1O95749 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.64■□□□□ 0.73
GGPS1O95749 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.64■□□□□ 0.73
GGPS1O95749 AC064836.3-201ENST00000607928 673 ntBASIC19.64■□□□□ 0.73
GGPS1O95749 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.64■□□□□ 0.73
GGPS1O95749 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.64■□□□□ 0.73
GGPS1O95749 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.64■□□□□ 0.73
GGPS1O95749 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
GGPS1O95749 AC097637.2-201ENST00000624096 1997 ntBASIC19.64■□□□□ 0.73
GGPS1O95749 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
GGPS1O95749 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
GGPS1O95749 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GGPS1O95749 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GGPS1O95749 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GGPS1O95749 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.63■□□□□ 0.73
GGPS1O95749 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GGPS1O95749 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GGPS1O95749 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GGPS1O95749 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
GGPS1O95749 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GGPS1O95749 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.63■□□□□ 0.73
GGPS1O95749 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GGPS1O95749 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.63■□□□□ 0.73
GGPS1O95749 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.63■□□□□ 0.73
GGPS1O95749 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.63■□□□□ 0.73
GGPS1O95749 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
GGPS1O95749 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
GGPS1O95749 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.63■□□□□ 0.73
GGPS1O95749 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GGPS1O95749 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.63■□□□□ 0.73
GGPS1O95749 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
GGPS1O95749 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.63■□□□□ 0.73
GGPS1O95749 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.63■□□□□ 0.73
GGPS1O95749 AC040169.1-201ENST00000565382 521 ntBASIC19.63■□□□□ 0.73
GGPS1O95749 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
GGPS1O95749 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC19.63■□□□□ 0.73
GGPS1O95749 AC018470.1-201ENST00000624790 3129 ntBASIC19.63■□□□□ 0.73
GGPS1O95749 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GGPS1O95749 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
GGPS1O95749 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
GGPS1O95749 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GGPS1O95749 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
GGPS1O95749 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GGPS1O95749 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.62■□□□□ 0.73
GGPS1O95749 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GGPS1O95749 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
GGPS1O95749 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.62■□□□□ 0.73
GGPS1O95749 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.62■□□□□ 0.73
GGPS1O95749 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GGPS1O95749 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
GGPS1O95749 MYCLP1-201ENST00000372451 1075 ntBASIC19.62■□□□□ 0.73
GGPS1O95749 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.62■□□□□ 0.73
GGPS1O95749 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GGPS1O95749 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC19.62■□□□□ 0.73
GGPS1O95749 AC108073.2-201ENST00000464002 357 ntBASIC19.62■□□□□ 0.73
GGPS1O95749 RPS15P9-201ENST00000494093 319 ntBASIC19.62■□□□□ 0.73
GGPS1O95749 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.62■□□□□ 0.73
GGPS1O95749 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.62■□□□□ 0.73
GGPS1O95749 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
GGPS1O95749 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
GGPS1O95749 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19.62■□□□□ 0.73
GGPS1O95749 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.62■□□□□ 0.73
GGPS1O95749 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.62■□□□□ 0.73
GGPS1O95749 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.62■□□□□ 0.73
GGPS1O95749 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
GGPS1O95749 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.62■□□□□ 0.73
GGPS1O95749 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
GGPS1O95749 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
GGPS1O95749 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
GGPS1O95749 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
GGPS1O95749 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GGPS1O95749 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GGPS1O95749 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.62■□□□□ 0.73
GGPS1O95749 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
GGPS1O95749 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.62■□□□□ 0.73
GGPS1O95749 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.62■□□□□ 0.73
GGPS1O95749 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GGPS1O95749 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GGPS1O95749 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GGPS1O95749 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.62■□□□□ 0.73
GGPS1O95749 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms