Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLPXO76031 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLPXO76031 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLPXO76031 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.15
CLPXO76031 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CLPXO76031 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLPXO76031 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15.96■□□□□ 0.15
CLPXO76031 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLPXO76031 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLPXO76031 AC211429.1-201ENST00000415277 523 ntBASIC15.96■□□□□ 0.15
CLPXO76031 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC15.96■□□□□ 0.15
CLPXO76031 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
CLPXO76031 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLPXO76031 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLPXO76031 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLPXO76031 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC15.96■□□□□ 0.15
CLPXO76031 LINC01023-201ENST00000606054 436 ntBASIC15.96■□□□□ 0.15
CLPXO76031 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLPXO76031 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLPXO76031 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.96■□□□□ 0.15
CLPXO76031 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CLPXO76031 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLPXO76031 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC15.96■□□□□ 0.15
CLPXO76031 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.96■□□□□ 0.15
CLPXO76031 PKD1P5-201ENST00000532415 10291 ntBASIC15.96■□□□□ 0.15
CLPXO76031 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLPXO76031 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.96■□□□□ 0.15
CLPXO76031 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLPXO76031 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLPXO76031 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC15.96■□□□□ 0.15
CLPXO76031 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.96■□□□□ 0.15
CLPXO76031 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLPXO76031 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLPXO76031 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CLPXO76031 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CLPXO76031 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
CLPXO76031 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
CLPXO76031 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CLPXO76031 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CLPXO76031 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLPXO76031 AC104640.1-201ENST00000562617 2109 ntBASIC15.95■□□□□ 0.14
CLPXO76031 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLPXO76031 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.95■□□□□ 0.14
CLPXO76031 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLPXO76031 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.95■□□□□ 0.14
CLPXO76031 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.95■□□□□ 0.14
CLPXO76031 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLPXO76031 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC15.95■□□□□ 0.14
CLPXO76031 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLPXO76031 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLPXO76031 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLPXO76031 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLPXO76031 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLPXO76031 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC15.95■□□□□ 0.14
CLPXO76031 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC15.95■□□□□ 0.14
CLPXO76031 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC15.95■□□□□ 0.14
CLPXO76031 FAM210CP-201ENST00000445714 574 ntBASIC15.95■□□□□ 0.14
CLPXO76031 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLPXO76031 RPS20-210ENST00000523936 899 ntTSL 2 BASIC15.95■□□□□ 0.14
CLPXO76031 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLPXO76031 AL160286.2-201ENST00000567150 934 ntBASIC15.95■□□□□ 0.14
CLPXO76031 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC15.95■□□□□ 0.14
CLPXO76031 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLPXO76031 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLPXO76031 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CLPXO76031 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.95■□□□□ 0.14
CLPXO76031 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLPXO76031 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC15.95■□□□□ 0.14
CLPXO76031 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CLPXO76031 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CLPXO76031 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC15.95■□□□□ 0.14
CLPXO76031 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLPXO76031 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CLPXO76031 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLPXO76031 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.95■□□□□ 0.14
CLPXO76031 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLPXO76031 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CLPXO76031 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.94■□□□□ 0.14
CLPXO76031 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLPXO76031 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
CLPXO76031 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLPXO76031 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CLPXO76031 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLPXO76031 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.94■□□□□ 0.14
CLPXO76031 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC15.94■□□□□ 0.14
CLPXO76031 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CLPXO76031 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.94■□□□□ 0.14
CLPXO76031 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.94■□□□□ 0.14
CLPXO76031 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.94■□□□□ 0.14
CLPXO76031 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.94■□□□□ 0.14
CLPXO76031 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CLPXO76031 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CLPXO76031 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLPXO76031 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CLPXO76031 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CLPXO76031 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC15.94■□□□□ 0.14
CLPXO76031 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLPXO76031 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CLPXO76031 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC15.94■□□□□ 0.14
CLPXO76031 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms