Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.6■□□□□ 0.41
RFPL1O75677 UBALD1-205ENST00000590891 2641 ntBASIC17.6■□□□□ 0.41
RFPL1O75677 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.6■□□□□ 0.41
RFPL1O75677 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFPL1O75677 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFPL1O75677 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFPL1O75677 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.6■□□□□ 0.41
RFPL1O75677 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFPL1O75677 AC034232.1-201ENST00000506026 1064 ntBASIC17.6■□□□□ 0.41
RFPL1O75677 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.6■□□□□ 0.41
RFPL1O75677 AC009154.2-201ENST00000621177 724 ntBASIC17.6■□□□□ 0.41
RFPL1O75677 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFPL1O75677 BX276092.7-203ENST00000637198 1536 ntBASIC17.6■□□□□ 0.41
RFPL1O75677 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFPL1O75677 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFPL1O75677 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RFPL1O75677 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.6■□□□□ 0.41
RFPL1O75677 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFPL1O75677 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.6■□□□□ 0.41
RFPL1O75677 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFPL1O75677 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RFPL1O75677 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFPL1O75677 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.6■□□□□ 0.41
RFPL1O75677 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFPL1O75677 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFPL1O75677 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFPL1O75677 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFPL1O75677 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.6■□□□□ 0.41
RFPL1O75677 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFPL1O75677 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
RFPL1O75677 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
RFPL1O75677 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFPL1O75677 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
RFPL1O75677 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFPL1O75677 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFPL1O75677 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RFPL1O75677 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RFPL1O75677 AC105020.1-201ENST00000435356 2205 ntBASIC17.59■□□□□ 0.41
RFPL1O75677 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFPL1O75677 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RFPL1O75677 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFPL1O75677 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.59■□□□□ 0.41
RFPL1O75677 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFPL1O75677 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RFPL1O75677 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFPL1O75677 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RFPL1O75677 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RFPL1O75677 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFPL1O75677 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFPL1O75677 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFPL1O75677 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RFPL1O75677 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RFPL1O75677 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.59■□□□□ 0.41
RFPL1O75677 AC112698.1-201ENST00000510299 916 ntBASIC17.59■□□□□ 0.41
RFPL1O75677 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RFPL1O75677 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.59■□□□□ 0.41
RFPL1O75677 AC004263.2-201ENST00000617183 678 ntBASIC17.59■□□□□ 0.41
RFPL1O75677 AC012313.10-201ENST00000623509 926 ntBASIC17.59■□□□□ 0.41
RFPL1O75677 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFPL1O75677 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFPL1O75677 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RFPL1O75677 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RFPL1O75677 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFPL1O75677 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFPL1O75677 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
RFPL1O75677 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
RFPL1O75677 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RFPL1O75677 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
RFPL1O75677 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RFPL1O75677 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RFPL1O75677 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RFPL1O75677 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RFPL1O75677 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RFPL1O75677 AL391807.1-203ENST00000604392 2365 ntBASIC17.58■□□□□ 0.41
RFPL1O75677 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.58■□□□□ 0.41
RFPL1O75677 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RFPL1O75677 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RFPL1O75677 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RFPL1O75677 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFPL1O75677 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFPL1O75677 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFPL1O75677 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RFPL1O75677 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.58■□□□□ 0.4
RFPL1O75677 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.58■□□□□ 0.4
RFPL1O75677 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.58■□□□□ 0.4
RFPL1O75677 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.58■□□□□ 0.4
RFPL1O75677 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
RFPL1O75677 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
RFPL1O75677 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RFPL1O75677 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFPL1O75677 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
RFPL1O75677 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.58■□□□□ 0.4
RFPL1O75677 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFPL1O75677 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFPL1O75677 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFPL1O75677 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
RFPL1O75677 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.58■□□□□ 0.4
RFPL1O75677 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
RFPL1O75677 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFPL1O75677 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms