Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TCRBV3S1A0A5B6 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.42■□□□□ 0.22
TCRBV3S1A0A5B6 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TCRBV3S1A0A5B6 MST1L-201ENST00000442552 2185 ntBASIC16.42■□□□□ 0.22
TCRBV3S1A0A5B6 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TCRBV3S1A0A5B6 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TCRBV3S1A0A5B6 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TCRBV3S1A0A5B6 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
TCRBV3S1A0A5B6 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
TCRBV3S1A0A5B6 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TCRBV3S1A0A5B6 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TCRBV3S1A0A5B6 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TCRBV3S1A0A5B6 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
TCRBV3S1A0A5B6 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TCRBV3S1A0A5B6 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TCRBV3S1A0A5B6 AC105917.1-201ENST00000506637 2539 ntBASIC16.42■□□□□ 0.22
TCRBV3S1A0A5B6 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
TCRBV3S1A0A5B6 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.42■□□□□ 0.22
TCRBV3S1A0A5B6 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TCRBV3S1A0A5B6 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TCRBV3S1A0A5B6 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TCRBV3S1A0A5B6 AL513477.1-201ENST00000602865 2407 ntBASIC16.41■□□□□ 0.22
TCRBV3S1A0A5B6 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
TCRBV3S1A0A5B6 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TCRBV3S1A0A5B6 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
TCRBV3S1A0A5B6 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TCRBV3S1A0A5B6 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TCRBV3S1A0A5B6 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TCRBV3S1A0A5B6 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TCRBV3S1A0A5B6 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.41■□□□□ 0.22
TCRBV3S1A0A5B6 LINC00554-201ENST00000564841 3011 ntBASIC16.41■□□□□ 0.22
TCRBV3S1A0A5B6 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TCRBV3S1A0A5B6 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TCRBV3S1A0A5B6 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TCRBV3S1A0A5B6 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TCRBV3S1A0A5B6 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TCRBV3S1A0A5B6 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.41■□□□□ 0.22
TCRBV3S1A0A5B6 RPPH1-201ENST00000516869 333 ntBASIC16.41■□□□□ 0.22
TCRBV3S1A0A5B6 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TCRBV3S1A0A5B6 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.41■□□□□ 0.22
TCRBV3S1A0A5B6 AC006058.3-201ENST00000606217 1069 ntBASIC16.41■□□□□ 0.22
TCRBV3S1A0A5B6 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.41■□□□□ 0.22
TCRBV3S1A0A5B6 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.41■□□□□ 0.22
TCRBV3S1A0A5B6 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.41■□□□□ 0.22
TCRBV3S1A0A5B6 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TCRBV3S1A0A5B6 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.41■□□□□ 0.22
TCRBV3S1A0A5B6 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TCRBV3S1A0A5B6 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TCRBV3S1A0A5B6 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TCRBV3S1A0A5B6 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.41■□□□□ 0.22
TCRBV3S1A0A5B6 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TCRBV3S1A0A5B6 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TCRBV3S1A0A5B6 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TCRBV3S1A0A5B6 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TCRBV3S1A0A5B6 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.41■□□□□ 0.22
TCRBV3S1A0A5B6 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TCRBV3S1A0A5B6 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TCRBV3S1A0A5B6 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TCRBV3S1A0A5B6 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TCRBV3S1A0A5B6 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
TCRBV3S1A0A5B6 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.4■□□□□ 0.22
TCRBV3S1A0A5B6 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TCRBV3S1A0A5B6 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TCRBV3S1A0A5B6 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
TCRBV3S1A0A5B6 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
TCRBV3S1A0A5B6 AC132872.4-202ENST00000622924 2756 ntBASIC16.4■□□□□ 0.22
TCRBV3S1A0A5B6 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TCRBV3S1A0A5B6 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TCRBV3S1A0A5B6 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TCRBV3S1A0A5B6 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
TCRBV3S1A0A5B6 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
TCRBV3S1A0A5B6 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.4■□□□□ 0.22
TCRBV3S1A0A5B6 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.4■□□□□ 0.22
TCRBV3S1A0A5B6 MIR3917-201ENST00000580971 93 ntBASIC16.4■□□□□ 0.22
TCRBV3S1A0A5B6 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.4■□□□□ 0.22
TCRBV3S1A0A5B6 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.4■□□□□ 0.22
TCRBV3S1A0A5B6 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
TCRBV3S1A0A5B6 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TCRBV3S1A0A5B6 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
TCRBV3S1A0A5B6 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.4■□□□□ 0.22
TCRBV3S1A0A5B6 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TCRBV3S1A0A5B6 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TCRBV3S1A0A5B6 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TCRBV3S1A0A5B6 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TCRBV3S1A0A5B6 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.4■□□□□ 0.22
TCRBV3S1A0A5B6 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TCRBV3S1A0A5B6 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.4■□□□□ 0.22
TCRBV3S1A0A5B6 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
TCRBV3S1A0A5B6 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TCRBV3S1A0A5B6 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.4■□□□□ 0.22
TCRBV3S1A0A5B6 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.4■□□□□ 0.22
TCRBV3S1A0A5B6 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TCRBV3S1A0A5B6 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
TCRBV3S1A0A5B6 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.22
TCRBV3S1A0A5B6 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TCRBV3S1A0A5B6 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
TCRBV3S1A0A5B6 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TCRBV3S1A0A5B6 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TCRBV3S1A0A5B6 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TCRBV3S1A0A5B6 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms