Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC15.49■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 AC009053.2-201ENST00000563701 2365 ntBASIC15.49■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 HCG11-201ENST00000411553 5696 ntBASIC15.49■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.48■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.48■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.48■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.48■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 RCN1P2-201ENST00000398357 915 ntBASIC15.48■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 ATP5G2P1-201ENST00000433580 426 ntBASIC15.48■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.48■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.48■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.48■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.48■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 AP000867.3-201ENST00000524675 377 ntBASIC15.48■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 AC074051.2-201ENST00000565115 352 ntBASIC15.48■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 NT5C-211ENST00000582170 653 ntTSL 3 BASIC15.48■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 AC091076.1-201ENST00000610741 619 ntBASIC15.48■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 AC016396.2-201ENST00000562575 1417 ntBASIC15.48■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.48■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.48■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.48■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 AC116353.5-201ENST00000638148 1699 ntBASIC15.48■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.47■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 AL353593.2-201ENST00000602529 1483 ntBASIC15.47■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC15.47■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 AC096582.2-201ENST00000510860 516 ntBASIC15.47■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.47■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 IGHV3-52-201ENST00000519770 353 ntBASIC15.47■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.47■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.47■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.47■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 AC093458.2-201ENST00000623150 629 ntBASIC15.47■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 INTS4P1-201ENST00000438455 1935 ntBASIC15.47■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.46■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 AC046185.3-201ENST00000623228 1824 ntBASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms