Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.81■□□□□ 0.6
PCDHB7Q9Y5E2 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB7Q9Y5E2 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDHB7Q9Y5E2 AC025580.3-201ENST00000617932 1424 ntBASIC18.81■□□□□ 0.6
PCDHB7Q9Y5E2 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB7Q9Y5E2 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDHB7Q9Y5E2 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB7Q9Y5E2 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB7Q9Y5E2 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHB7Q9Y5E2 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB7Q9Y5E2 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB7Q9Y5E2 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB7Q9Y5E2 KRT18P55-202ENST00000578578 1546 ntBASIC18.8■□□□□ 0.6
PCDHB7Q9Y5E2 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB7Q9Y5E2 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB7Q9Y5E2 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
PCDHB7Q9Y5E2 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB7Q9Y5E2 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
PCDHB7Q9Y5E2 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PCDHB7Q9Y5E2 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB7Q9Y5E2 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB7Q9Y5E2 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB7Q9Y5E2 ACTG1P4-201ENST00000425123 1122 ntBASIC18.8■□□□□ 0.6
PCDHB7Q9Y5E2 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB7Q9Y5E2 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
PCDHB7Q9Y5E2 AC074386.1-202ENST00000463561 864 ntBASIC18.8■□□□□ 0.6
PCDHB7Q9Y5E2 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHB7Q9Y5E2 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDHB7Q9Y5E2 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.8■□□□□ 0.6
PCDHB7Q9Y5E2 AC023141.13-201ENST00000604991 943 ntBASIC18.8■□□□□ 0.6
PCDHB7Q9Y5E2 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDHB7Q9Y5E2 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
PCDHB7Q9Y5E2 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB7Q9Y5E2 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
PCDHB7Q9Y5E2 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
PCDHB7Q9Y5E2 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB7Q9Y5E2 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB7Q9Y5E2 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHB7Q9Y5E2 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.8■□□□□ 0.6
PCDHB7Q9Y5E2 AC093503.3-201ENST00000624917 2352 ntBASIC18.79■□□□□ 0.6
PCDHB7Q9Y5E2 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
PCDHB7Q9Y5E2 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB7Q9Y5E2 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB7Q9Y5E2 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDHB7Q9Y5E2 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDHB7Q9Y5E2 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHB7Q9Y5E2 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB7Q9Y5E2 BX323043.1-201ENST00000641006 1765 ntBASIC18.79■□□□□ 0.6
PCDHB7Q9Y5E2 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDHB7Q9Y5E2 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.79■□□□□ 0.6
PCDHB7Q9Y5E2 AL031432.2-201ENST00000566714 459 ntBASIC18.79■□□□□ 0.6
PCDHB7Q9Y5E2 AL928711.1-201ENST00000570165 459 ntBASIC18.79■□□□□ 0.6
PCDHB7Q9Y5E2 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDHB7Q9Y5E2 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PCDHB7Q9Y5E2 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHB7Q9Y5E2 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDHB7Q9Y5E2 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB7Q9Y5E2 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB7Q9Y5E2 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB7Q9Y5E2 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB7Q9Y5E2 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB7Q9Y5E2 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
PCDHB7Q9Y5E2 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB7Q9Y5E2 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHB7Q9Y5E2 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHB7Q9Y5E2 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB7Q9Y5E2 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB7Q9Y5E2 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.78■□□□□ 0.6
PCDHB7Q9Y5E2 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
PCDHB7Q9Y5E2 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.78■□□□□ 0.6
PCDHB7Q9Y5E2 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHB7Q9Y5E2 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.78■□□□□ 0.6
PCDHB7Q9Y5E2 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB7Q9Y5E2 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB7Q9Y5E2 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB7Q9Y5E2 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.78■□□□□ 0.6
PCDHB7Q9Y5E2 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHB7Q9Y5E2 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB7Q9Y5E2 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB7Q9Y5E2 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB7Q9Y5E2 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PCDHB7Q9Y5E2 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB7Q9Y5E2 AL590787.1-201ENST00000568856 1315 ntBASIC18.77■□□□□ 0.6
PCDHB7Q9Y5E2 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB7Q9Y5E2 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB7Q9Y5E2 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB7Q9Y5E2 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB7Q9Y5E2 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHB7Q9Y5E2 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDHB7Q9Y5E2 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.77■□□□□ 0.6
PCDHB7Q9Y5E2 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB7Q9Y5E2 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.77■□□□□ 0.6
PCDHB7Q9Y5E2 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.77■□□□□ 0.6
PCDHB7Q9Y5E2 AP002472.1-201ENST00000577490 586 ntBASIC18.77■□□□□ 0.6
PCDHB7Q9Y5E2 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHB7Q9Y5E2 FLJ13224-201ENST00000313737 1514 ntBASIC18.77■□□□□ 0.6
PCDHB7Q9Y5E2 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB7Q9Y5E2 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDHB7Q9Y5E2 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHB7Q9Y5E2 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms