Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSU72Q9NP77 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SSU72Q9NP77 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.41■□□□□ 0.38
SSU72Q9NP77 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.41■□□□□ 0.38
SSU72Q9NP77 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SSU72Q9NP77 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSU72Q9NP77 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
SSU72Q9NP77 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSU72Q9NP77 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
SSU72Q9NP77 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSU72Q9NP77 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSU72Q9NP77 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSU72Q9NP77 AP000523.1-201ENST00000398242 1049 ntBASIC17.41■□□□□ 0.38
SSU72Q9NP77 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
SSU72Q9NP77 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.41■□□□□ 0.38
SSU72Q9NP77 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
SSU72Q9NP77 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.41■□□□□ 0.38
SSU72Q9NP77 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SSU72Q9NP77 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.41■□□□□ 0.38
SSU72Q9NP77 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.41■□□□□ 0.38
SSU72Q9NP77 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SSU72Q9NP77 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSU72Q9NP77 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSU72Q9NP77 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSU72Q9NP77 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SSU72Q9NP77 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.41■□□□□ 0.38
SSU72Q9NP77 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SSU72Q9NP77 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSU72Q9NP77 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSU72Q9NP77 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SSU72Q9NP77 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSU72Q9NP77 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SSU72Q9NP77 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSU72Q9NP77 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SSU72Q9NP77 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.4■□□□□ 0.38
SSU72Q9NP77 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSU72Q9NP77 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SSU72Q9NP77 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSU72Q9NP77 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.4■□□□□ 0.38
SSU72Q9NP77 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SSU72Q9NP77 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.4■□□□□ 0.38
SSU72Q9NP77 AC022188.1-201ENST00000620960 1664 ntBASIC17.4■□□□□ 0.38
SSU72Q9NP77 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SSU72Q9NP77 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSU72Q9NP77 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SSU72Q9NP77 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SSU72Q9NP77 AL390955.1-201ENST00000428694 934 ntBASIC17.4■□□□□ 0.38
SSU72Q9NP77 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.4■□□□□ 0.38
SSU72Q9NP77 AC128688.1-201ENST00000487626 519 ntBASIC17.4■□□□□ 0.38
SSU72Q9NP77 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.4■□□□□ 0.38
SSU72Q9NP77 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.4■□□□□ 0.38
SSU72Q9NP77 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.4■□□□□ 0.38
SSU72Q9NP77 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSU72Q9NP77 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSU72Q9NP77 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.4■□□□□ 0.38
SSU72Q9NP77 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSU72Q9NP77 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSU72Q9NP77 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SSU72Q9NP77 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.4■□□□□ 0.38
SSU72Q9NP77 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.4■□□□□ 0.38
SSU72Q9NP77 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.4■□□□□ 0.38
SSU72Q9NP77 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
SSU72Q9NP77 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSU72Q9NP77 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSU72Q9NP77 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSU72Q9NP77 AL513523.2-202ENST00000427283 2040 ntBASIC17.4■□□□□ 0.38
SSU72Q9NP77 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSU72Q9NP77 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.4■□□□□ 0.38
SSU72Q9NP77 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.4■□□□□ 0.38
SSU72Q9NP77 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SSU72Q9NP77 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.4■□□□□ 0.38
SSU72Q9NP77 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
SSU72Q9NP77 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.39■□□□□ 0.38
SSU72Q9NP77 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.39■□□□□ 0.38
SSU72Q9NP77 PCDHB17P-201ENST00000539533 2393 ntBASIC17.39■□□□□ 0.38
SSU72Q9NP77 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.39■□□□□ 0.37
SSU72Q9NP77 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSU72Q9NP77 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SSU72Q9NP77 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSU72Q9NP77 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.39■□□□□ 0.37
SSU72Q9NP77 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSU72Q9NP77 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SSU72Q9NP77 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSU72Q9NP77 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSU72Q9NP77 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.39■□□□□ 0.37
SSU72Q9NP77 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSU72Q9NP77 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSU72Q9NP77 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.39■□□□□ 0.37
SSU72Q9NP77 MYCLP1-201ENST00000372451 1075 ntBASIC17.39■□□□□ 0.37
SSU72Q9NP77 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSU72Q9NP77 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.39■□□□□ 0.37
SSU72Q9NP77 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSU72Q9NP77 TSPY12P-201ENST00000421279 868 ntBASIC17.39■□□□□ 0.37
SSU72Q9NP77 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.39■□□□□ 0.37
SSU72Q9NP77 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
SSU72Q9NP77 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.39■□□□□ 0.37
SSU72Q9NP77 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SSU72Q9NP77 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSU72Q9NP77 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SSU72Q9NP77 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms