Protein–RNA interactions for Protein: Q9HD34

LYRM4, LYR motif-containing protein 4, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM4Q9HD34 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LYRM4Q9HD34 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
LYRM4Q9HD34 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LYRM4Q9HD34 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.49■□□□□ 0.23
LYRM4Q9HD34 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LYRM4Q9HD34 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LYRM4Q9HD34 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LYRM4Q9HD34 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LYRM4Q9HD34 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
LYRM4Q9HD34 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
LYRM4Q9HD34 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.49■□□□□ 0.23
LYRM4Q9HD34 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.49■□□□□ 0.23
LYRM4Q9HD34 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.49■□□□□ 0.23
LYRM4Q9HD34 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.49■□□□□ 0.23
LYRM4Q9HD34 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LYRM4Q9HD34 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.49■□□□□ 0.23
LYRM4Q9HD34 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
LYRM4Q9HD34 AL355877.3-201ENST00000622820 899 ntBASIC16.49■□□□□ 0.23
LYRM4Q9HD34 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
LYRM4Q9HD34 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.49■□□□□ 0.23
LYRM4Q9HD34 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LYRM4Q9HD34 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
LYRM4Q9HD34 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LYRM4Q9HD34 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
LYRM4Q9HD34 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.49■□□□□ 0.23
LYRM4Q9HD34 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LYRM4Q9HD34 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LYRM4Q9HD34 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
LYRM4Q9HD34 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LYRM4Q9HD34 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LYRM4Q9HD34 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LYRM4Q9HD34 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.48■□□□□ 0.23
LYRM4Q9HD34 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
LYRM4Q9HD34 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LYRM4Q9HD34 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LYRM4Q9HD34 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LYRM4Q9HD34 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LYRM4Q9HD34 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LYRM4Q9HD34 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LYRM4Q9HD34 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LYRM4Q9HD34 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LYRM4Q9HD34 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LYRM4Q9HD34 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.48■□□□□ 0.23
LYRM4Q9HD34 SIGLEC30P-201ENST00000455569 941 ntBASIC16.48■□□□□ 0.23
LYRM4Q9HD34 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.48■□□□□ 0.23
LYRM4Q9HD34 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LYRM4Q9HD34 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LYRM4Q9HD34 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.48■□□□□ 0.23
LYRM4Q9HD34 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LYRM4Q9HD34 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LYRM4Q9HD34 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LYRM4Q9HD34 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LYRM4Q9HD34 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LYRM4Q9HD34 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.48■□□□□ 0.23
LYRM4Q9HD34 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LYRM4Q9HD34 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.48■□□□□ 0.23
LYRM4Q9HD34 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
LYRM4Q9HD34 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LYRM4Q9HD34 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
LYRM4Q9HD34 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LYRM4Q9HD34 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
LYRM4Q9HD34 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.47■□□□□ 0.23
LYRM4Q9HD34 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LYRM4Q9HD34 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LYRM4Q9HD34 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LYRM4Q9HD34 AKR1C7P-201ENST00000305623 895 ntBASIC16.47■□□□□ 0.23
LYRM4Q9HD34 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LYRM4Q9HD34 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LYRM4Q9HD34 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LYRM4Q9HD34 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LYRM4Q9HD34 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LYRM4Q9HD34 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LYRM4Q9HD34 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
LYRM4Q9HD34 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.47■□□□□ 0.23
LYRM4Q9HD34 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.47■□□□□ 0.23
LYRM4Q9HD34 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LYRM4Q9HD34 AL450487.1-201ENST00000426799 995 ntBASIC16.47■□□□□ 0.23
LYRM4Q9HD34 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LYRM4Q9HD34 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LYRM4Q9HD34 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LYRM4Q9HD34 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LYRM4Q9HD34 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.47■□□□□ 0.23
LYRM4Q9HD34 MTDHP3-201ENST00000594186 672 ntBASIC16.47■□□□□ 0.23
LYRM4Q9HD34 AC008608.2-201ENST00000606089 416 ntBASIC16.47■□□□□ 0.23
LYRM4Q9HD34 AL139288.1-201ENST00000623748 933 ntBASIC16.47■□□□□ 0.23
LYRM4Q9HD34 AC005332.8-201ENST00000622750 2735 ntBASIC16.47■□□□□ 0.23
LYRM4Q9HD34 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LYRM4Q9HD34 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.47■□□□□ 0.23
LYRM4Q9HD34 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.47■□□□□ 0.23
LYRM4Q9HD34 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LYRM4Q9HD34 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LYRM4Q9HD34 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
LYRM4Q9HD34 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.47■□□□□ 0.23
LYRM4Q9HD34 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.47■□□□□ 0.23
LYRM4Q9HD34 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
LYRM4Q9HD34 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LYRM4Q9HD34 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LYRM4Q9HD34 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.46■□□□□ 0.23
LYRM4Q9HD34 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LYRM4Q9HD34 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms