Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC40Q9H9A6 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC40Q9H9A6 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LRRC40Q9H9A6 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
LRRC40Q9H9A6 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LRRC40Q9H9A6 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.83■□□□□ 0.45
LRRC40Q9H9A6 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.83■□□□□ 0.45
LRRC40Q9H9A6 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LRRC40Q9H9A6 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
LRRC40Q9H9A6 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.83■□□□□ 0.45
LRRC40Q9H9A6 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LRRC40Q9H9A6 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
LRRC40Q9H9A6 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LRRC40Q9H9A6 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.83■□□□□ 0.45
LRRC40Q9H9A6 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LRRC40Q9H9A6 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
LRRC40Q9H9A6 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
LRRC40Q9H9A6 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRRC40Q9H9A6 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRRC40Q9H9A6 MYCLP1-201ENST00000372451 1075 ntBASIC17.83■□□□□ 0.44
LRRC40Q9H9A6 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.83■□□□□ 0.44
LRRC40Q9H9A6 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
LRRC40Q9H9A6 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.83■□□□□ 0.44
LRRC40Q9H9A6 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.83■□□□□ 0.44
LRRC40Q9H9A6 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.83■□□□□ 0.44
LRRC40Q9H9A6 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LRRC40Q9H9A6 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
LRRC40Q9H9A6 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRRC40Q9H9A6 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRRC40Q9H9A6 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRRC40Q9H9A6 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.83■□□□□ 0.44
LRRC40Q9H9A6 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRRC40Q9H9A6 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRRC40Q9H9A6 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.83■□□□□ 0.44
LRRC40Q9H9A6 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC40Q9H9A6 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC40Q9H9A6 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.82■□□□□ 0.44
LRRC40Q9H9A6 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC40Q9H9A6 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.82■□□□□ 0.44
LRRC40Q9H9A6 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.82■□□□□ 0.44
LRRC40Q9H9A6 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.82■□□□□ 0.44
LRRC40Q9H9A6 AC016734.2-201ENST00000624325 1377 ntBASIC17.82■□□□□ 0.44
LRRC40Q9H9A6 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
LRRC40Q9H9A6 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
LRRC40Q9H9A6 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC40Q9H9A6 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC40Q9H9A6 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC40Q9H9A6 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.82■□□□□ 0.44
LRRC40Q9H9A6 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC40Q9H9A6 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC40Q9H9A6 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.82■□□□□ 0.44
LRRC40Q9H9A6 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC40Q9H9A6 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC40Q9H9A6 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC40Q9H9A6 AC122714.2-201ENST00000502787 707 ntBASIC17.82■□□□□ 0.44
LRRC40Q9H9A6 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.82■□□□□ 0.44
LRRC40Q9H9A6 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC40Q9H9A6 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.82■□□□□ 0.44
LRRC40Q9H9A6 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC40Q9H9A6 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.82■□□□□ 0.44
LRRC40Q9H9A6 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
LRRC40Q9H9A6 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
LRRC40Q9H9A6 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.82■□□□□ 0.44
LRRC40Q9H9A6 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC40Q9H9A6 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC40Q9H9A6 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
LRRC40Q9H9A6 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.82■□□□□ 0.44
LRRC40Q9H9A6 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
LRRC40Q9H9A6 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC40Q9H9A6 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.82■□□□□ 0.44
LRRC40Q9H9A6 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC40Q9H9A6 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
LRRC40Q9H9A6 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC40Q9H9A6 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC40Q9H9A6 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC40Q9H9A6 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC40Q9H9A6 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC40Q9H9A6 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC40Q9H9A6 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC40Q9H9A6 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC40Q9H9A6 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC40Q9H9A6 FAM220CP-201ENST00000395253 831 ntBASIC17.81■□□□□ 0.44
LRRC40Q9H9A6 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC40Q9H9A6 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC40Q9H9A6 PCED1CP-201ENST00000419887 785 ntBASIC17.81■□□□□ 0.44
LRRC40Q9H9A6 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.81■□□□□ 0.44
LRRC40Q9H9A6 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.81■□□□□ 0.44
LRRC40Q9H9A6 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.81■□□□□ 0.44
LRRC40Q9H9A6 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.81■□□□□ 0.44
LRRC40Q9H9A6 IGHV3-52-201ENST00000519770 353 ntBASIC17.81■□□□□ 0.44
LRRC40Q9H9A6 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
LRRC40Q9H9A6 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
LRRC40Q9H9A6 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC40Q9H9A6 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC40Q9H9A6 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
LRRC40Q9H9A6 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC40Q9H9A6 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC40Q9H9A6 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.81■□□□□ 0.44
LRRC40Q9H9A6 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.81■□□□□ 0.44
LRRC40Q9H9A6 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms