Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CMTM3Q96MX0 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CMTM3Q96MX0 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CMTM3Q96MX0 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
CMTM3Q96MX0 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CMTM3Q96MX0 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CMTM3Q96MX0 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.13■□□□□ 0.01
CMTM3Q96MX0 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CMTM3Q96MX0 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CMTM3Q96MX0 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CMTM3Q96MX0 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CMTM3Q96MX0 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CMTM3Q96MX0 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CMTM3Q96MX0 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.12■□□□□ 0.01
CMTM3Q96MX0 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CMTM3Q96MX0 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC15.12■□□□□ 0.01
CMTM3Q96MX0 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CMTM3Q96MX0 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CMTM3Q96MX0 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CMTM3Q96MX0 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CMTM3Q96MX0 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CMTM3Q96MX0 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.12■□□□□ 0.01
CMTM3Q96MX0 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.12■□□□□ 0.01
CMTM3Q96MX0 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CMTM3Q96MX0 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CMTM3Q96MX0 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.12■□□□□ 0.01
CMTM3Q96MX0 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.12■□□□□ 0.01
CMTM3Q96MX0 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.12■□□□□ 0.01
CMTM3Q96MX0 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CMTM3Q96MX0 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CMTM3Q96MX0 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CMTM3Q96MX0 SLC25A1P3-201ENST00000395415 828 ntBASIC15.12■□□□□ 0.01
CMTM3Q96MX0 HLA-L-209ENST00000420110 1011 ntBASIC15.12■□□□□ 0.01
CMTM3Q96MX0 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CMTM3Q96MX0 PHB2-202ENST00000440277 996 ntTSL 5 BASIC15.12■□□□□ 0.01
CMTM3Q96MX0 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC15.12■□□□□ 0.01
CMTM3Q96MX0 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
CMTM3Q96MX0 AC097488.1-201ENST00000507834 756 ntBASIC15.12■□□□□ 0.01
CMTM3Q96MX0 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.12■□□□□ 0.01
CMTM3Q96MX0 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CMTM3Q96MX0 RPS15-203ENST00000586096 570 ntTSL 2 BASIC15.12■□□□□ 0.01
CMTM3Q96MX0 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
CMTM3Q96MX0 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CMTM3Q96MX0 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CMTM3Q96MX0 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.12■□□□□ 0.01
CMTM3Q96MX0 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.12■□□□□ 0.01
CMTM3Q96MX0 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CMTM3Q96MX0 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.12■□□□□ 0.01
CMTM3Q96MX0 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CMTM3Q96MX0 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
CMTM3Q96MX0 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CMTM3Q96MX0 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CMTM3Q96MX0 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CMTM3Q96MX0 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CMTM3Q96MX0 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.11■□□□□ 0.01
CMTM3Q96MX0 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CMTM3Q96MX0 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CMTM3Q96MX0 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CMTM3Q96MX0 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CMTM3Q96MX0 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CMTM3Q96MX0 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CMTM3Q96MX0 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
CMTM3Q96MX0 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CMTM3Q96MX0 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CMTM3Q96MX0 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CMTM3Q96MX0 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CMTM3Q96MX0 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.11■□□□□ 0.01
CMTM3Q96MX0 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CMTM3Q96MX0 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CMTM3Q96MX0 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CMTM3Q96MX0 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CMTM3Q96MX0 TSPY17P-201ENST00000450329 467 ntBASIC15.11■□□□□ 0.01
CMTM3Q96MX0 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.11■□□□□ 0.01
CMTM3Q96MX0 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC15.11■□□□□ 0.01
CMTM3Q96MX0 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CMTM3Q96MX0 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CMTM3Q96MX0 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CMTM3Q96MX0 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.11■□□□□ 0.01
CMTM3Q96MX0 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CMTM3Q96MX0 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CMTM3Q96MX0 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CMTM3Q96MX0 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CMTM3Q96MX0 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.11■□□□□ 0.01
CMTM3Q96MX0 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.11■□□□□ 0.01
CMTM3Q96MX0 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CMTM3Q96MX0 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CMTM3Q96MX0 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CMTM3Q96MX0 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CMTM3Q96MX0 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CMTM3Q96MX0 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
CMTM3Q96MX0 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CMTM3Q96MX0 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CMTM3Q96MX0 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CMTM3Q96MX0 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.1■□□□□ 0.01
CMTM3Q96MX0 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CMTM3Q96MX0 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CMTM3Q96MX0 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CMTM3Q96MX0 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CMTM3Q96MX0 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CMTM3Q96MX0 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms