Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
SMIM4Q8WVI0 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
SMIM4Q8WVI0 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SMIM4Q8WVI0 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
SMIM4Q8WVI0 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
SMIM4Q8WVI0 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.03■□□□□ -0
SMIM4Q8WVI0 FSCN1P1-201ENST00000568912 1481 ntBASIC15.03■□□□□ -0
SMIM4Q8WVI0 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SMIM4Q8WVI0 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SMIM4Q8WVI0 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SMIM4Q8WVI0 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SMIM4Q8WVI0 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SMIM4Q8WVI0 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
SMIM4Q8WVI0 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
SMIM4Q8WVI0 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SMIM4Q8WVI0 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
SMIM4Q8WVI0 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
SMIM4Q8WVI0 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC15.03■□□□□ -0
SMIM4Q8WVI0 AC069152.1-201ENST00000438030 544 ntBASIC15.03■□□□□ -0
SMIM4Q8WVI0 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC15.03■□□□□ -0
SMIM4Q8WVI0 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.03■□□□□ -0
SMIM4Q8WVI0 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC15.03■□□□□ -0
SMIM4Q8WVI0 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC15.03■□□□□ -0
SMIM4Q8WVI0 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SMIM4Q8WVI0 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
SMIM4Q8WVI0 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
SMIM4Q8WVI0 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC15.03■□□□□ -0
SMIM4Q8WVI0 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC15.03■□□□□ -0
SMIM4Q8WVI0 CABP2-204ENST00000636477 941 ntTSL 5 BASIC15.03■□□□□ -0
SMIM4Q8WVI0 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.03■□□□□ -0
SMIM4Q8WVI0 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
SMIM4Q8WVI0 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SMIM4Q8WVI0 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.03■□□□□ -0
SMIM4Q8WVI0 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SMIM4Q8WVI0 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
SMIM4Q8WVI0 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.03■□□□□ -0
SMIM4Q8WVI0 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
SMIM4Q8WVI0 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SMIM4Q8WVI0 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
SMIM4Q8WVI0 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.03■□□□□ -0
SMIM4Q8WVI0 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.03■□□□□ -0
SMIM4Q8WVI0 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.03■□□□□ -0
SMIM4Q8WVI0 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
SMIM4Q8WVI0 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.03■□□□□ -0
SMIM4Q8WVI0 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SMIM4Q8WVI0 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
SMIM4Q8WVI0 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SMIM4Q8WVI0 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SMIM4Q8WVI0 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
SMIM4Q8WVI0 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SMIM4Q8WVI0 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SMIM4Q8WVI0 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SMIM4Q8WVI0 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.02■□□□□ -0
SMIM4Q8WVI0 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
SMIM4Q8WVI0 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.02■□□□□ -0
SMIM4Q8WVI0 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
SMIM4Q8WVI0 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
SMIM4Q8WVI0 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.02■□□□□ -0
SMIM4Q8WVI0 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SMIM4Q8WVI0 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SMIM4Q8WVI0 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.02■□□□□ -0
SMIM4Q8WVI0 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
SMIM4Q8WVI0 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
SMIM4Q8WVI0 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SMIM4Q8WVI0 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.02■□□□□ -0
SMIM4Q8WVI0 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
SMIM4Q8WVI0 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SMIM4Q8WVI0 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SMIM4Q8WVI0 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SMIM4Q8WVI0 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.02■□□□□ -0
SMIM4Q8WVI0 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC15.02■□□□□ -0
SMIM4Q8WVI0 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SMIM4Q8WVI0 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC15.02■□□□□ -0
SMIM4Q8WVI0 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.02■□□□□ -0
SMIM4Q8WVI0 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC15.02■□□□□ -0
SMIM4Q8WVI0 MESTP1-201ENST00000404287 994 ntBASIC15.02■□□□□ -0
SMIM4Q8WVI0 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
SMIM4Q8WVI0 MFAP1P1-201ENST00000442257 1255 ntBASIC15.02■□□□□ -0
SMIM4Q8WVI0 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC15.02■□□□□ -0
SMIM4Q8WVI0 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.02■□□□□ -0
SMIM4Q8WVI0 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC15.02■□□□□ -0
SMIM4Q8WVI0 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC15.02■□□□□ -0
SMIM4Q8WVI0 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC15.02■□□□□ -0
SMIM4Q8WVI0 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC15.02■□□□□ -0
SMIM4Q8WVI0 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
SMIM4Q8WVI0 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SMIM4Q8WVI0 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.02□□□□□ -0.01
SMIM4Q8WVI0 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SMIM4Q8WVI0 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
SMIM4Q8WVI0 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SMIM4Q8WVI0 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SMIM4Q8WVI0 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
SMIM4Q8WVI0 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SMIM4Q8WVI0 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
SMIM4Q8WVI0 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.02□□□□□ -0.01
SMIM4Q8WVI0 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SMIM4Q8WVI0 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SMIM4Q8WVI0 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SMIM4Q8WVI0 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SMIM4Q8WVI0 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms