Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SVIPQ8NHG7 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
SVIPQ8NHG7 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC10.89□□□□□ -0.67
SVIPQ8NHG7 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC10.89□□□□□ -0.67
SVIPQ8NHG7 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SVIPQ8NHG7 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
SVIPQ8NHG7 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SVIPQ8NHG7 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SVIPQ8NHG7 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
SVIPQ8NHG7 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC10.89□□□□□ -0.67
SVIPQ8NHG7 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
SVIPQ8NHG7 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SVIPQ8NHG7 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
SVIPQ8NHG7 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SVIPQ8NHG7 AC130686.1-201ENST00000622936 2466 ntBASIC10.89□□□□□ -0.67
SVIPQ8NHG7 ITGA2B-201ENST00000262407 3333 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SVIPQ8NHG7 METTL13-201ENST00000361735 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SVIPQ8NHG7 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC10.89□□□□□ -0.67
SVIPQ8NHG7 AL589935.2-201ENST00000616471 1231 ntBASIC10.89□□□□□ -0.67
SVIPQ8NHG7 ASL-203ENST00000380839 1765 ntTSL 5 BASIC10.89□□□□□ -0.67
SVIPQ8NHG7 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SVIPQ8NHG7 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
SVIPQ8NHG7 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SVIPQ8NHG7 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC10.89□□□□□ -0.67
SVIPQ8NHG7 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SVIPQ8NHG7 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC10.89□□□□□ -0.67
SVIPQ8NHG7 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SVIPQ8NHG7 TMEM8B-201ENST00000377988 3731 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SVIPQ8NHG7 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SVIPQ8NHG7 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SVIPQ8NHG7 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
SVIPQ8NHG7 AC008870.1-201ENST00000566996 3009 ntTSL 2 BASIC10.89□□□□□ -0.67
SVIPQ8NHG7 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
SVIPQ8NHG7 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
SVIPQ8NHG7 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
SVIPQ8NHG7 ME2-216ENST00000639850 2331 ntTSL 5 BASIC10.89□□□□□ -0.67
SVIPQ8NHG7 ADGRE2-212ENST00000601345 3128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
SVIPQ8NHG7 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SVIPQ8NHG7 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SVIPQ8NHG7 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SVIPQ8NHG7 AP2A1-202ENST00000359032 3286 ntAPPRIS P4 TSL 5 BASIC10.89□□□□□ -0.67
SVIPQ8NHG7 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SVIPQ8NHG7 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SVIPQ8NHG7 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SVIPQ8NHG7 AC004494.1-201ENST00000613210 2775 ntBASIC10.88□□□□□ -0.67
SVIPQ8NHG7 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SVIPQ8NHG7 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SVIPQ8NHG7 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
SVIPQ8NHG7 AC134407.2-201ENST00000625089 1978 ntBASIC10.88□□□□□ -0.67
SVIPQ8NHG7 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SVIPQ8NHG7 CNN2-207ENST00000565096 2109 ntTSL 2 BASIC10.88□□□□□ -0.67
SVIPQ8NHG7 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC10.88□□□□□ -0.67
SVIPQ8NHG7 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
SVIPQ8NHG7 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
SVIPQ8NHG7 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
SVIPQ8NHG7 ACOX3-201ENST00000356406 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SVIPQ8NHG7 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
SVIPQ8NHG7 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC10.88□□□□□ -0.67
SVIPQ8NHG7 SCNN1A-203ENST00000360168 3481 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
SVIPQ8NHG7 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
SVIPQ8NHG7 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
SVIPQ8NHG7 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
SVIPQ8NHG7 C8A-201ENST00000361249 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SVIPQ8NHG7 CICP18-201ENST00000406017 2812 ntBASIC10.88□□□□□ -0.67
SVIPQ8NHG7 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
SVIPQ8NHG7 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC10.88□□□□□ -0.67
SVIPQ8NHG7 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SVIPQ8NHG7 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SVIPQ8NHG7 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SVIPQ8NHG7 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
SVIPQ8NHG7 EIF3D-201ENST00000216190 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SVIPQ8NHG7 SLA2-201ENST00000262866 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SVIPQ8NHG7 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
SVIPQ8NHG7 HK3-201ENST00000292432 3066 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SVIPQ8NHG7 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SVIPQ8NHG7 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SVIPQ8NHG7 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
SVIPQ8NHG7 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
SVIPQ8NHG7 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
SVIPQ8NHG7 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC10.88□□□□□ -0.67
SVIPQ8NHG7 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC10.88□□□□□ -0.67
SVIPQ8NHG7 AC005622.1-201ENST00000636801 1703 ntBASIC10.88□□□□□ -0.67
SVIPQ8NHG7 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC10.88□□□□□ -0.67
SVIPQ8NHG7 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC10.88□□□□□ -0.67
SVIPQ8NHG7 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
SVIPQ8NHG7 C17orf53-202ENST00000319977 2725 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
SVIPQ8NHG7 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SVIPQ8NHG7 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SVIPQ8NHG7 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SVIPQ8NHG7 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
SVIPQ8NHG7 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SVIPQ8NHG7 PHF21B-203ENST00000403565 3586 ntTSL 2 BASIC10.88□□□□□ -0.67
SVIPQ8NHG7 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
SVIPQ8NHG7 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
SVIPQ8NHG7 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC10.88□□□□□ -0.67
SVIPQ8NHG7 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SVIPQ8NHG7 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SVIPQ8NHG7 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SVIPQ8NHG7 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SVIPQ8NHG7 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms