Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NUP43Q8NFH3 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
NUP43Q8NFH3 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NUP43Q8NFH3 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NUP43Q8NFH3 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NUP43Q8NFH3 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
NUP43Q8NFH3 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.45■□□□□ 0.22
NUP43Q8NFH3 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
NUP43Q8NFH3 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
NUP43Q8NFH3 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
NUP43Q8NFH3 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NUP43Q8NFH3 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
NUP43Q8NFH3 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NUP43Q8NFH3 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
NUP43Q8NFH3 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NUP43Q8NFH3 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NUP43Q8NFH3 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
NUP43Q8NFH3 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.44■□□□□ 0.22
NUP43Q8NFH3 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NUP43Q8NFH3 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NUP43Q8NFH3 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NUP43Q8NFH3 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NUP43Q8NFH3 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
NUP43Q8NFH3 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NUP43Q8NFH3 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NUP43Q8NFH3 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.44■□□□□ 0.22
NUP43Q8NFH3 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NUP43Q8NFH3 AC091607.1-201ENST00000490318 1060 ntBASIC16.44■□□□□ 0.22
NUP43Q8NFH3 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.44■□□□□ 0.22
NUP43Q8NFH3 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NUP43Q8NFH3 AL139327.4-201ENST00000612362 153 ntBASIC16.44■□□□□ 0.22
NUP43Q8NFH3 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.44■□□□□ 0.22
NUP43Q8NFH3 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NUP43Q8NFH3 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.44■□□□□ 0.22
NUP43Q8NFH3 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
NUP43Q8NFH3 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NUP43Q8NFH3 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NUP43Q8NFH3 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.44■□□□□ 0.22
NUP43Q8NFH3 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
NUP43Q8NFH3 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NUP43Q8NFH3 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NUP43Q8NFH3 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.43■□□□□ 0.22
NUP43Q8NFH3 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NUP43Q8NFH3 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NUP43Q8NFH3 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NUP43Q8NFH3 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
NUP43Q8NFH3 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
NUP43Q8NFH3 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
NUP43Q8NFH3 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NUP43Q8NFH3 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.43■□□□□ 0.22
NUP43Q8NFH3 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.43■□□□□ 0.22
NUP43Q8NFH3 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.43■□□□□ 0.22
NUP43Q8NFH3 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NUP43Q8NFH3 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.43■□□□□ 0.22
NUP43Q8NFH3 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NUP43Q8NFH3 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.43■□□□□ 0.22
NUP43Q8NFH3 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.43■□□□□ 0.22
NUP43Q8NFH3 AC122714.2-201ENST00000502787 707 ntBASIC16.43■□□□□ 0.22
NUP43Q8NFH3 KRT18P35-201ENST00000510488 1269 ntBASIC16.43■□□□□ 0.22
NUP43Q8NFH3 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.43■□□□□ 0.22
NUP43Q8NFH3 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.43■□□□□ 0.22
NUP43Q8NFH3 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.43■□□□□ 0.22
NUP43Q8NFH3 AC109462.3-201ENST00000573934 613 ntBASIC16.43■□□□□ 0.22
NUP43Q8NFH3 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
NUP43Q8NFH3 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.43■□□□□ 0.22
NUP43Q8NFH3 AP000550.4-202ENST00000639755 178 ntBASIC16.43■□□□□ 0.22
NUP43Q8NFH3 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.43■□□□□ 0.22
NUP43Q8NFH3 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NUP43Q8NFH3 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NUP43Q8NFH3 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
NUP43Q8NFH3 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NUP43Q8NFH3 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
NUP43Q8NFH3 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
NUP43Q8NFH3 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NUP43Q8NFH3 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NUP43Q8NFH3 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.43■□□□□ 0.22
NUP43Q8NFH3 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
NUP43Q8NFH3 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NUP43Q8NFH3 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.43■□□□□ 0.22
NUP43Q8NFH3 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.43■□□□□ 0.22
NUP43Q8NFH3 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.43■□□□□ 0.22
NUP43Q8NFH3 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NUP43Q8NFH3 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NUP43Q8NFH3 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
NUP43Q8NFH3 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.42■□□□□ 0.22
NUP43Q8NFH3 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NUP43Q8NFH3 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.42■□□□□ 0.22
NUP43Q8NFH3 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NUP43Q8NFH3 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.42■□□□□ 0.22
NUP43Q8NFH3 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NUP43Q8NFH3 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NUP43Q8NFH3 FAM220CP-201ENST00000395253 831 ntBASIC16.42■□□□□ 0.22
NUP43Q8NFH3 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.42■□□□□ 0.22
NUP43Q8NFH3 IGHV3-52-201ENST00000519770 353 ntBASIC16.42■□□□□ 0.22
NUP43Q8NFH3 AC009533.2-201ENST00000543664 586 ntBASIC16.42■□□□□ 0.22
NUP43Q8NFH3 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.42■□□□□ 0.22
NUP43Q8NFH3 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NUP43Q8NFH3 AP002414.4-201ENST00000589764 1148 ntBASIC16.42■□□□□ 0.22
NUP43Q8NFH3 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NUP43Q8NFH3 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms