Protein–RNA interactions for Protein: Q8N427

NME8, Thioredoxin domain-containing protein 3, humanhuman

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME8Q8N427 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NME8Q8N427 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.3■□□□□ 0.68
NME8Q8N427 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.3■□□□□ 0.68
NME8Q8N427 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19.3■□□□□ 0.68
NME8Q8N427 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NME8Q8N427 AC108751.1-201ENST00000490852 363 ntBASIC19.3■□□□□ 0.68
NME8Q8N427 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
NME8Q8N427 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.3■□□□□ 0.68
NME8Q8N427 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NME8Q8N427 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.3■□□□□ 0.68
NME8Q8N427 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC19.3■□□□□ 0.68
NME8Q8N427 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.3■□□□□ 0.68
NME8Q8N427 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.3■□□□□ 0.68
NME8Q8N427 AL139424.1-201ENST00000607572 797 ntBASIC19.3■□□□□ 0.68
NME8Q8N427 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.3■□□□□ 0.68
NME8Q8N427 FLJ13224-201ENST00000313737 1514 ntBASIC19.3■□□□□ 0.68
NME8Q8N427 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.3■□□□□ 0.68
NME8Q8N427 AC090164.3-201ENST00000610780 2143 ntBASIC19.3■□□□□ 0.68
NME8Q8N427 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.3■□□□□ 0.68
NME8Q8N427 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NME8Q8N427 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NME8Q8N427 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NME8Q8N427 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
NME8Q8N427 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NME8Q8N427 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.29■□□□□ 0.68
NME8Q8N427 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NME8Q8N427 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NME8Q8N427 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NME8Q8N427 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
NME8Q8N427 AC006504.4-201ENST00000592118 1568 ntBASIC19.29■□□□□ 0.68
NME8Q8N427 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NME8Q8N427 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NME8Q8N427 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NME8Q8N427 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
NME8Q8N427 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.29■□□□□ 0.68
NME8Q8N427 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.29■□□□□ 0.68
NME8Q8N427 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.29■□□□□ 0.68
NME8Q8N427 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC19.29■□□□□ 0.68
NME8Q8N427 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC19.29■□□□□ 0.68
NME8Q8N427 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.29■□□□□ 0.68
NME8Q8N427 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.29■□□□□ 0.68
NME8Q8N427 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NME8Q8N427 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
NME8Q8N427 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NME8Q8N427 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NME8Q8N427 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
NME8Q8N427 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NME8Q8N427 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
NME8Q8N427 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.29■□□□□ 0.68
NME8Q8N427 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NME8Q8N427 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.29■□□□□ 0.68
NME8Q8N427 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.29■□□□□ 0.68
NME8Q8N427 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NME8Q8N427 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
NME8Q8N427 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
NME8Q8N427 AP000997.3-201ENST00000623333 2250 ntBASIC19.28■□□□□ 0.68
NME8Q8N427 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
NME8Q8N427 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.28■□□□□ 0.68
NME8Q8N427 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
NME8Q8N427 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
NME8Q8N427 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
NME8Q8N427 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NME8Q8N427 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
NME8Q8N427 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.28■□□□□ 0.68
NME8Q8N427 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
NME8Q8N427 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NME8Q8N427 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NME8Q8N427 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.28■□□□□ 0.68
NME8Q8N427 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NME8Q8N427 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.28■□□□□ 0.68
NME8Q8N427 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
NME8Q8N427 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NME8Q8N427 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
NME8Q8N427 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NME8Q8N427 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
NME8Q8N427 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
NME8Q8N427 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
NME8Q8N427 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.28■□□□□ 0.68
NME8Q8N427 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.28■□□□□ 0.68
NME8Q8N427 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NME8Q8N427 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
NME8Q8N427 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC19.28■□□□□ 0.68
NME8Q8N427 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NME8Q8N427 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NME8Q8N427 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.28■□□□□ 0.68
NME8Q8N427 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
NME8Q8N427 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NME8Q8N427 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.28■□□□□ 0.68
NME8Q8N427 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NME8Q8N427 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NME8Q8N427 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.28■□□□□ 0.68
NME8Q8N427 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
NME8Q8N427 AC009336.1-201ENST00000608941 1553 ntBASIC19.27■□□□□ 0.68
NME8Q8N427 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.27■□□□□ 0.68
NME8Q8N427 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NME8Q8N427 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
NME8Q8N427 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
NME8Q8N427 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.27■□□□□ 0.68
NME8Q8N427 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
NME8Q8N427 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms