Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.35■□□□□ 0.05
HIST1H3AP68431 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HIST1H3AP68431 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIST1H3AP68431 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIST1H3AP68431 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIST1H3AP68431 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.34■□□□□ 0.05
HIST1H3AP68431 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIST1H3AP68431 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIST1H3AP68431 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIST1H3AP68431 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.34■□□□□ 0.05
HIST1H3AP68431 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIST1H3AP68431 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIST1H3AP68431 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.34■□□□□ 0.05
HIST1H3AP68431 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.34■□□□□ 0.05
HIST1H3AP68431 COPS8-203ENST00000409334 794 ntTSL 5 BASIC15.34■□□□□ 0.05
HIST1H3AP68431 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIST1H3AP68431 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HIST1H3AP68431 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.34■□□□□ 0.05
HIST1H3AP68431 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.34■□□□□ 0.05
HIST1H3AP68431 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIST1H3AP68431 RMI2-205ENST00000576027 818 ntTSL 2 BASIC15.34■□□□□ 0.05
HIST1H3AP68431 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.34■□□□□ 0.05
HIST1H3AP68431 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.34■□□□□ 0.05
HIST1H3AP68431 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
HIST1H3AP68431 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIST1H3AP68431 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HIST1H3AP68431 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIST1H3AP68431 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.34■□□□□ 0.05
HIST1H3AP68431 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.34■□□□□ 0.05
HIST1H3AP68431 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIST1H3AP68431 AC116353.5-201ENST00000638148 1699 ntBASIC15.34■□□□□ 0.05
HIST1H3AP68431 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.34■□□□□ 0.05
HIST1H3AP68431 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIST1H3AP68431 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIST1H3AP68431 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.34■□□□□ 0.05
HIST1H3AP68431 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIST1H3AP68431 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HIST1H3AP68431 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.34■□□□□ 0.05
HIST1H3AP68431 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIST1H3AP68431 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIST1H3AP68431 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIST1H3AP68431 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.34■□□□□ 0.05
HIST1H3AP68431 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
HIST1H3AP68431 AL353593.2-201ENST00000602529 1483 ntBASIC15.33■□□□□ 0.05
HIST1H3AP68431 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.05
HIST1H3AP68431 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.33■□□□□ 0.05
HIST1H3AP68431 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
HIST1H3AP68431 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.33■□□□□ 0.05
HIST1H3AP68431 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
HIST1H3AP68431 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
HIST1H3AP68431 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
HIST1H3AP68431 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
HIST1H3AP68431 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
HIST1H3AP68431 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.05
HIST1H3AP68431 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
HIST1H3AP68431 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HIST1H3AP68431 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.33■□□□□ 0.04
HIST1H3AP68431 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
HIST1H3AP68431 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
HIST1H3AP68431 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HIST1H3AP68431 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HIST1H3AP68431 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HIST1H3AP68431 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HIST1H3AP68431 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HIST1H3AP68431 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.33■□□□□ 0.04
HIST1H3AP68431 KRT18P35-201ENST00000510488 1269 ntBASIC15.33■□□□□ 0.04
HIST1H3AP68431 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.33■□□□□ 0.04
HIST1H3AP68431 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.33■□□□□ 0.04
HIST1H3AP68431 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.33■□□□□ 0.04
HIST1H3AP68431 MIR3180-1-201ENST00000580374 94 ntBASIC15.33■□□□□ 0.04
HIST1H3AP68431 MIR3180-3-201ENST00000584616 94 ntBASIC15.33■□□□□ 0.04
HIST1H3AP68431 AP002414.4-201ENST00000589764 1148 ntBASIC15.33■□□□□ 0.04
HIST1H3AP68431 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HIST1H3AP68431 NPAP1P7-201ENST00000613027 823 ntBASIC15.33■□□□□ 0.04
HIST1H3AP68431 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
HIST1H3AP68431 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC15.33■□□□□ 0.04
HIST1H3AP68431 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HIST1H3AP68431 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HIST1H3AP68431 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.33■□□□□ 0.04
HIST1H3AP68431 AP001094.4-201ENST00000579008 2176 ntBASIC15.33■□□□□ 0.04
HIST1H3AP68431 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HIST1H3AP68431 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HIST1H3AP68431 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HIST1H3AP68431 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
HIST1H3AP68431 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
HIST1H3AP68431 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
HIST1H3AP68431 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HIST1H3AP68431 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
HIST1H3AP68431 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.33■□□□□ 0.04
HIST1H3AP68431 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
HIST1H3AP68431 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.33■□□□□ 0.04
HIST1H3AP68431 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
HIST1H3AP68431 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.33■□□□□ 0.04
HIST1H3AP68431 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
HIST1H3AP68431 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.32■□□□□ 0.04
HIST1H3AP68431 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
HIST1H3AP68431 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HIST1H3AP68431 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HIST1H3AP68431 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HIST1H3AP68431 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms