Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NR1H2P55055 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NR1H2P55055 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NR1H2P55055 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
NR1H2P55055 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NR1H2P55055 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NR1H2P55055 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NR1H2P55055 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.7■□□□□ 0.26
NR1H2P55055 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NR1H2P55055 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NR1H2P55055 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
NR1H2P55055 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
NR1H2P55055 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
NR1H2P55055 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.7■□□□□ 0.26
NR1H2P55055 TSPY23P-201ENST00000440136 739 ntBASIC16.7■□□□□ 0.26
NR1H2P55055 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.7■□□□□ 0.26
NR1H2P55055 AC008040.2-201ENST00000461049 708 ntBASIC16.7■□□□□ 0.26
NR1H2P55055 CA15P1-201ENST00000481698 905 ntBASIC16.7■□□□□ 0.26
NR1H2P55055 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.7■□□□□ 0.26
NR1H2P55055 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.7■□□□□ 0.26
NR1H2P55055 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NR1H2P55055 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.7■□□□□ 0.26
NR1H2P55055 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.7■□□□□ 0.26
NR1H2P55055 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NR1H2P55055 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
NR1H2P55055 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.7■□□□□ 0.26
NR1H2P55055 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NR1H2P55055 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.7■□□□□ 0.26
NR1H2P55055 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.7■□□□□ 0.26
NR1H2P55055 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NR1H2P55055 AL357033.4-201ENST00000617703 1807 ntBASIC16.7■□□□□ 0.26
NR1H2P55055 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.7■□□□□ 0.26
NR1H2P55055 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NR1H2P55055 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.7■□□□□ 0.26
NR1H2P55055 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.69■□□□□ 0.26
NR1H2P55055 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.69■□□□□ 0.26
NR1H2P55055 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NR1H2P55055 PHGDH-209ENST00000641074 1780 ntBASIC16.69■□□□□ 0.26
NR1H2P55055 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NR1H2P55055 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NR1H2P55055 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NR1H2P55055 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
NR1H2P55055 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NR1H2P55055 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NR1H2P55055 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.69■□□□□ 0.26
NR1H2P55055 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.69■□□□□ 0.26
NR1H2P55055 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NR1H2P55055 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
NR1H2P55055 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.69■□□□□ 0.26
NR1H2P55055 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.69■□□□□ 0.26
NR1H2P55055 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NR1H2P55055 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.69■□□□□ 0.26
NR1H2P55055 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.69■□□□□ 0.26
NR1H2P55055 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.69■□□□□ 0.26
NR1H2P55055 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.69■□□□□ 0.26
NR1H2P55055 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.69■□□□□ 0.26
NR1H2P55055 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NR1H2P55055 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NR1H2P55055 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.69■□□□□ 0.26
NR1H2P55055 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NR1H2P55055 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
NR1H2P55055 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.69■□□□□ 0.26
NR1H2P55055 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NR1H2P55055 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.69■□□□□ 0.26
NR1H2P55055 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NR1H2P55055 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.69■□□□□ 0.26
NR1H2P55055 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NR1H2P55055 AC133963.1-201ENST00000504166 1679 ntBASIC16.69■□□□□ 0.26
NR1H2P55055 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NR1H2P55055 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NR1H2P55055 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NR1H2P55055 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NR1H2P55055 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.68■□□□□ 0.26
NR1H2P55055 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.68■□□□□ 0.26
NR1H2P55055 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NR1H2P55055 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NR1H2P55055 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NR1H2P55055 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NR1H2P55055 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NR1H2P55055 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NR1H2P55055 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NR1H2P55055 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NR1H2P55055 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NR1H2P55055 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.68■□□□□ 0.26
NR1H2P55055 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
NR1H2P55055 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.68■□□□□ 0.26
NR1H2P55055 NTF6B-201ENST00000591913 560 ntBASIC16.68■□□□□ 0.26
NR1H2P55055 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.68■□□□□ 0.26
NR1H2P55055 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NR1H2P55055 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NR1H2P55055 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.68■□□□□ 0.26
NR1H2P55055 AC092850.2-201ENST00000623821 2697 ntBASIC16.68■□□□□ 0.26
NR1H2P55055 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NR1H2P55055 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NR1H2P55055 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NR1H2P55055 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
NR1H2P55055 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NR1H2P55055 GMCL1P1-201ENST00000463439 1581 ntBASIC16.68■□□□□ 0.26
NR1H2P55055 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NR1H2P55055 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms