Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.4■□□□□ 0.54
CLCN4P51793 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLCN4P51793 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLCN4P51793 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.4■□□□□ 0.54
CLCN4P51793 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CLCN4P51793 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.4■□□□□ 0.54
CLCN4P51793 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.39■□□□□ 0.54
CLCN4P51793 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CLCN4P51793 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLCN4P51793 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.39■□□□□ 0.53
CLCN4P51793 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLCN4P51793 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.39■□□□□ 0.53
CLCN4P51793 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.39■□□□□ 0.53
CLCN4P51793 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLCN4P51793 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLCN4P51793 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLCN4P51793 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CLCN4P51793 AL645939.2-201ENST00000427340 991 ntBASIC18.39■□□□□ 0.53
CLCN4P51793 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.39■□□□□ 0.53
CLCN4P51793 AC002558.1-201ENST00000488906 803 ntBASIC18.39■□□□□ 0.53
CLCN4P51793 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.39■□□□□ 0.53
CLCN4P51793 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.39■□□□□ 0.53
CLCN4P51793 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.39■□□□□ 0.53
CLCN4P51793 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLCN4P51793 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLCN4P51793 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLCN4P51793 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CLCN4P51793 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLCN4P51793 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CLCN4P51793 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.39■□□□□ 0.53
CLCN4P51793 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.39■□□□□ 0.53
CLCN4P51793 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CLCN4P51793 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLCN4P51793 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLCN4P51793 AC135776.1-201ENST00000319817 2481 ntBASIC18.39■□□□□ 0.53
CLCN4P51793 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLCN4P51793 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.38■□□□□ 0.53
CLCN4P51793 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLCN4P51793 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLCN4P51793 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLCN4P51793 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CLCN4P51793 AC135050.7-201ENST00000624508 2218 ntBASIC18.38■□□□□ 0.53
CLCN4P51793 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLCN4P51793 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.38■□□□□ 0.53
CLCN4P51793 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.38■□□□□ 0.53
CLCN4P51793 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.38■□□□□ 0.53
CLCN4P51793 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLCN4P51793 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLCN4P51793 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.38■□□□□ 0.53
CLCN4P51793 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLCN4P51793 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLCN4P51793 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLCN4P51793 AC025580.3-201ENST00000617932 1424 ntBASIC18.38■□□□□ 0.53
CLCN4P51793 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLCN4P51793 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CLCN4P51793 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLCN4P51793 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.38■□□□□ 0.53
CLCN4P51793 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.38■□□□□ 0.53
CLCN4P51793 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.38■□□□□ 0.53
CLCN4P51793 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLCN4P51793 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLCN4P51793 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CLCN4P51793 NEFHP1-201ENST00000412845 2629 ntBASIC18.37■□□□□ 0.53
CLCN4P51793 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CLCN4P51793 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCN4P51793 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCN4P51793 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCN4P51793 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.37■□□□□ 0.53
CLCN4P51793 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLCN4P51793 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCN4P51793 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.37■□□□□ 0.53
CLCN4P51793 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.37■□□□□ 0.53
CLCN4P51793 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLCN4P51793 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCN4P51793 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.37■□□□□ 0.53
CLCN4P51793 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
CLCN4P51793 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCN4P51793 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.37■□□□□ 0.53
CLCN4P51793 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.37■□□□□ 0.53
CLCN4P51793 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCN4P51793 AC027612.4-201ENST00000605371 583 ntBASIC18.37■□□□□ 0.53
CLCN4P51793 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLCN4P51793 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLCN4P51793 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
CLCN4P51793 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLCN4P51793 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCN4P51793 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLCN4P51793 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCN4P51793 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.37■□□□□ 0.53
CLCN4P51793 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCN4P51793 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
CLCN4P51793 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.37■□□□□ 0.53
CLCN4P51793 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLCN4P51793 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCN4P51793 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.37■□□□□ 0.53
CLCN4P51793 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLCN4P51793 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
CLCN4P51793 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLCN4P51793 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.36■□□□□ 0.53
CLCN4P51793 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms