Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.93■□□□□ 0.46
CLDN11O75508 AC004817.3-201ENST00000602957 2129 ntBASIC17.93■□□□□ 0.46
CLDN11O75508 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CLDN11O75508 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN11O75508 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN11O75508 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
CLDN11O75508 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.93■□□□□ 0.46
CLDN11O75508 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN11O75508 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN11O75508 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.93■□□□□ 0.46
CLDN11O75508 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.93■□□□□ 0.46
CLDN11O75508 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN11O75508 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CLDN11O75508 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CLDN11O75508 AC018470.1-201ENST00000624790 3129 ntBASIC17.92■□□□□ 0.46
CLDN11O75508 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN11O75508 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN11O75508 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.92■□□□□ 0.46
CLDN11O75508 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CLDN11O75508 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN11O75508 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CLDN11O75508 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN11O75508 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN11O75508 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CLDN11O75508 AL031284.1-201ENST00000419297 478 ntBASIC17.92■□□□□ 0.46
CLDN11O75508 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.92■□□□□ 0.46
CLDN11O75508 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.92■□□□□ 0.46
CLDN11O75508 AP001005.1-201ENST00000571755 1248 ntBASIC17.92■□□□□ 0.46
CLDN11O75508 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CLDN11O75508 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.92■□□□□ 0.46
CLDN11O75508 AC148477.8-201ENST00000624298 468 ntBASIC17.92■□□□□ 0.46
CLDN11O75508 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN11O75508 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CLDN11O75508 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN11O75508 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN11O75508 HLA-A-201ENST00000376802 1334 ntBASIC17.92■□□□□ 0.46
CLDN11O75508 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN11O75508 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CLDN11O75508 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN11O75508 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN11O75508 AC046185.3-201ENST00000623228 1824 ntBASIC17.91■□□□□ 0.46
CLDN11O75508 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN11O75508 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CLDN11O75508 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CLDN11O75508 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN11O75508 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN11O75508 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN11O75508 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN11O75508 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN11O75508 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.91■□□□□ 0.46
CLDN11O75508 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.91■□□□□ 0.46
CLDN11O75508 RPS2P1-201ENST00000434010 821 ntBASIC17.91■□□□□ 0.46
CLDN11O75508 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.91■□□□□ 0.46
CLDN11O75508 OR7E14P-202ENST00000530490 1290 ntBASIC17.91■□□□□ 0.46
CLDN11O75508 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.91■□□□□ 0.46
CLDN11O75508 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.91■□□□□ 0.46
CLDN11O75508 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CLDN11O75508 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.91■□□□□ 0.46
CLDN11O75508 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.91■□□□□ 0.46
CLDN11O75508 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.91■□□□□ 0.46
CLDN11O75508 AC107918.4-202ENST00000641623 219 ntBASIC17.91■□□□□ 0.46
CLDN11O75508 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN11O75508 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN11O75508 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN11O75508 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN11O75508 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN11O75508 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN11O75508 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN11O75508 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CLDN11O75508 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN11O75508 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN11O75508 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN11O75508 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN11O75508 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.9■□□□□ 0.46
CLDN11O75508 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN11O75508 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.9■□□□□ 0.46
CLDN11O75508 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.9■□□□□ 0.46
CLDN11O75508 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.9■□□□□ 0.46
CLDN11O75508 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN11O75508 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.9■□□□□ 0.46
CLDN11O75508 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
CLDN11O75508 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN11O75508 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN11O75508 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN11O75508 LAGE3P1-201ENST00000425356 484 ntBASIC17.9■□□□□ 0.46
CLDN11O75508 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.9■□□□□ 0.46
CLDN11O75508 HNRNPDP1-201ENST00000439535 754 ntBASIC17.9■□□□□ 0.46
CLDN11O75508 AC093909.1-201ENST00000504731 1122 ntBASIC17.9■□□□□ 0.46
CLDN11O75508 RNA5SP419-201ENST00000515908 135 ntBASIC17.9■□□□□ 0.46
CLDN11O75508 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.9■□□□□ 0.46
CLDN11O75508 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.9■□□□□ 0.46
CLDN11O75508 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN11O75508 AL589182.2-201ENST00000619332 1049 ntBASIC17.9■□□□□ 0.46
CLDN11O75508 FAM215A-202ENST00000632077 792 ntBASIC17.9■□□□□ 0.46
CLDN11O75508 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.9■□□□□ 0.46
CLDN11O75508 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN11O75508 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN11O75508 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.9■□□□□ 0.46
CLDN11O75508 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN11O75508 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms