Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NDUFS3O75489 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NDUFS3O75489 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.53■□□□□ 0.4
NDUFS3O75489 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NDUFS3O75489 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NDUFS3O75489 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.53■□□□□ 0.4
NDUFS3O75489 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NDUFS3O75489 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NDUFS3O75489 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NDUFS3O75489 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NDUFS3O75489 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
NDUFS3O75489 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
NDUFS3O75489 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NDUFS3O75489 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NDUFS3O75489 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
NDUFS3O75489 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.52■□□□□ 0.4
NDUFS3O75489 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NDUFS3O75489 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NDUFS3O75489 CROCCP1-201ENST00000426910 5675 ntBASIC17.52■□□□□ 0.4
NDUFS3O75489 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
NDUFS3O75489 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
NDUFS3O75489 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
NDUFS3O75489 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.52■□□□□ 0.4
NDUFS3O75489 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NDUFS3O75489 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NDUFS3O75489 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NDUFS3O75489 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
NDUFS3O75489 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.52■□□□□ 0.4
NDUFS3O75489 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.52■□□□□ 0.4
NDUFS3O75489 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.52■□□□□ 0.4
NDUFS3O75489 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.52■□□□□ 0.4
NDUFS3O75489 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NDUFS3O75489 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.52■□□□□ 0.4
NDUFS3O75489 AL138831.2-201ENST00000606564 490 ntBASIC17.52■□□□□ 0.4
NDUFS3O75489 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NDUFS3O75489 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.52■□□□□ 0.4
NDUFS3O75489 AL358472.4-201ENST00000633140 710 ntBASIC17.52■□□□□ 0.4
NDUFS3O75489 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.52■□□□□ 0.4
NDUFS3O75489 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.52■□□□□ 0.39
NDUFS3O75489 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NDUFS3O75489 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NDUFS3O75489 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.51■□□□□ 0.39
NDUFS3O75489 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NDUFS3O75489 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NDUFS3O75489 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.51■□□□□ 0.39
NDUFS3O75489 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NDUFS3O75489 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NDUFS3O75489 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NDUFS3O75489 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NDUFS3O75489 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
NDUFS3O75489 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NDUFS3O75489 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NDUFS3O75489 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NDUFS3O75489 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NDUFS3O75489 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.51■□□□□ 0.39
NDUFS3O75489 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
NDUFS3O75489 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.51■□□□□ 0.39
NDUFS3O75489 MIR1224-201ENST00000408193 85 ntBASIC17.51■□□□□ 0.39
NDUFS3O75489 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NDUFS3O75489 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NDUFS3O75489 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.51■□□□□ 0.39
NDUFS3O75489 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
NDUFS3O75489 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
NDUFS3O75489 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
NDUFS3O75489 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NDUFS3O75489 AL445228.2-201ENST00000605589 952 ntBASIC17.51■□□□□ 0.39
NDUFS3O75489 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.51■□□□□ 0.39
NDUFS3O75489 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
NDUFS3O75489 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NDUFS3O75489 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NDUFS3O75489 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NDUFS3O75489 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NDUFS3O75489 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NDUFS3O75489 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
NDUFS3O75489 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
NDUFS3O75489 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NDUFS3O75489 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NDUFS3O75489 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NDUFS3O75489 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.51■□□□□ 0.39
NDUFS3O75489 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.51■□□□□ 0.39
NDUFS3O75489 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
NDUFS3O75489 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NDUFS3O75489 AL645608.8-201ENST00000606034 2086 ntBASIC17.51■□□□□ 0.39
NDUFS3O75489 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
NDUFS3O75489 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
NDUFS3O75489 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NDUFS3O75489 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
NDUFS3O75489 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NDUFS3O75489 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
NDUFS3O75489 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NDUFS3O75489 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NDUFS3O75489 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NDUFS3O75489 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NDUFS3O75489 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.5■□□□□ 0.39
NDUFS3O75489 AC002558.1-201ENST00000488906 803 ntBASIC17.5■□□□□ 0.39
NDUFS3O75489 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NDUFS3O75489 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.5■□□□□ 0.39
NDUFS3O75489 AC091076.1-201ENST00000610741 619 ntBASIC17.5■□□□□ 0.39
NDUFS3O75489 AC010331.1-201ENST00000611423 582 ntBASIC17.5■□□□□ 0.39
NDUFS3O75489 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms