Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH16O75309 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDH16O75309 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH16O75309 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CDH16O75309 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH16O75309 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH16O75309 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CDH16O75309 UNC93B2-201ENST00000285383 730 ntBASIC17.76■□□□□ 0.43
CDH16O75309 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH16O75309 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.76■□□□□ 0.43
CDH16O75309 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.76■□□□□ 0.43
CDH16O75309 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDH16O75309 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH16O75309 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CDH16O75309 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH16O75309 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDH16O75309 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDH16O75309 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH16O75309 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
CDH16O75309 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CDH16O75309 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDH16O75309 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CDH16O75309 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CDH16O75309 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH16O75309 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.76■□□□□ 0.43
CDH16O75309 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDH16O75309 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CDH16O75309 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH16O75309 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.75■□□□□ 0.43
CDH16O75309 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.75■□□□□ 0.43
CDH16O75309 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH16O75309 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDH16O75309 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH16O75309 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH16O75309 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.75■□□□□ 0.43
CDH16O75309 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.75■□□□□ 0.43
CDH16O75309 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.75■□□□□ 0.43
CDH16O75309 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CDH16O75309 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.75■□□□□ 0.43
CDH16O75309 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDH16O75309 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH16O75309 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.75■□□□□ 0.43
CDH16O75309 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH16O75309 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.75■□□□□ 0.43
CDH16O75309 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDH16O75309 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH16O75309 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH16O75309 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH16O75309 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDH16O75309 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.75■□□□□ 0.43
CDH16O75309 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.75■□□□□ 0.43
CDH16O75309 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.75■□□□□ 0.43
CDH16O75309 AL596275.1-201ENST00000423464 877 ntBASIC17.75■□□□□ 0.43
CDH16O75309 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.75■□□□□ 0.43
CDH16O75309 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDH16O75309 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.75■□□□□ 0.43
CDH16O75309 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.75■□□□□ 0.43
CDH16O75309 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CDH16O75309 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH16O75309 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDH16O75309 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.75■□□□□ 0.43
CDH16O75309 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDH16O75309 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH16O75309 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH16O75309 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDH16O75309 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.75■□□□□ 0.43
CDH16O75309 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDH16O75309 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDH16O75309 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.74■□□□□ 0.43
CDH16O75309 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH16O75309 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
CDH16O75309 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.74■□□□□ 0.43
CDH16O75309 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH16O75309 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.74■□□□□ 0.43
CDH16O75309 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDH16O75309 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH16O75309 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH16O75309 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH16O75309 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.74■□□□□ 0.43
CDH16O75309 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
CDH16O75309 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.74■□□□□ 0.43
CDH16O75309 AP003071.4-201ENST00000562276 1284 ntBASIC17.74■□□□□ 0.43
CDH16O75309 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDH16O75309 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.74■□□□□ 0.43
CDH16O75309 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH16O75309 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH16O75309 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDH16O75309 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CDH16O75309 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CDH16O75309 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CDH16O75309 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH16O75309 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CDH16O75309 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.74■□□□□ 0.43
CDH16O75309 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CDH16O75309 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDH16O75309 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDH16O75309 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.74■□□□□ 0.43
CDH16O75309 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH16O75309 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH16O75309 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms