Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PFDN1O60925 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.69■□□□□ 0.1
PFDN1O60925 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PFDN1O60925 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PFDN1O60925 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PFDN1O60925 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
PFDN1O60925 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PFDN1O60925 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PFDN1O60925 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC15.68■□□□□ 0.1
PFDN1O60925 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PFDN1O60925 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PFDN1O60925 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
PFDN1O60925 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PFDN1O60925 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PFDN1O60925 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.68■□□□□ 0.1
PFDN1O60925 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
PFDN1O60925 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
PFDN1O60925 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.68■□□□□ 0.1
PFDN1O60925 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PFDN1O60925 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PFDN1O60925 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PFDN1O60925 AC116351.2-201ENST00000606540 1585 ntBASIC15.68■□□□□ 0.1
PFDN1O60925 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PFDN1O60925 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PFDN1O60925 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PFDN1O60925 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PFDN1O60925 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC15.68■□□□□ 0.1
PFDN1O60925 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC15.68■□□□□ 0.1
PFDN1O60925 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PFDN1O60925 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PFDN1O60925 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PFDN1O60925 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.68■□□□□ 0.1
PFDN1O60925 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PFDN1O60925 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.68■□□□□ 0.1
PFDN1O60925 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PFDN1O60925 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.68■□□□□ 0.1
PFDN1O60925 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PFDN1O60925 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.68■□□□□ 0.1
PFDN1O60925 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC15.68■□□□□ 0.1
PFDN1O60925 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PFDN1O60925 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
PFDN1O60925 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
PFDN1O60925 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PFDN1O60925 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
PFDN1O60925 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
PFDN1O60925 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
PFDN1O60925 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PFDN1O60925 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.67■□□□□ 0.1
PFDN1O60925 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PFDN1O60925 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PFDN1O60925 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PFDN1O60925 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PFDN1O60925 NFYC-AS1-201ENST00000606277 1687 ntBASIC15.67■□□□□ 0.1
PFDN1O60925 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PFDN1O60925 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
PFDN1O60925 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC15.67■□□□□ 0.1
PFDN1O60925 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PFDN1O60925 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PFDN1O60925 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PFDN1O60925 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PFDN1O60925 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PFDN1O60925 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PFDN1O60925 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC15.67■□□□□ 0.1
PFDN1O60925 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PFDN1O60925 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC15.67■□□□□ 0.1
PFDN1O60925 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC15.67■□□□□ 0.1
PFDN1O60925 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
PFDN1O60925 AC022532.1-201ENST00000624563 1728 ntBASIC15.67■□□□□ 0.1
PFDN1O60925 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PFDN1O60925 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PFDN1O60925 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.67■□□□□ 0.1
PFDN1O60925 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PFDN1O60925 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PFDN1O60925 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PFDN1O60925 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PFDN1O60925 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PFDN1O60925 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
PFDN1O60925 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC15.67■□□□□ 0.1
PFDN1O60925 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.67■□□□□ 0.1
PFDN1O60925 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
PFDN1O60925 ADAMTS7P1-201ENST00000613213 4793 ntBASIC15.67■□□□□ 0.1
PFDN1O60925 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
PFDN1O60925 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PFDN1O60925 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PFDN1O60925 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
PFDN1O60925 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
PFDN1O60925 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PFDN1O60925 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PFDN1O60925 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PFDN1O60925 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC15.66■□□□□ 0.1
PFDN1O60925 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
PFDN1O60925 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PFDN1O60925 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
PFDN1O60925 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PFDN1O60925 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PFDN1O60925 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.66■□□□□ 0.1
PFDN1O60925 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PFDN1O60925 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC15.66■□□□□ 0.1
PFDN1O60925 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.66■□□□□ 0.1
PFDN1O60925 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms