Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 AC096734.2-201ENST00000562054 433 ntBASIC16.57■□□□□ 0.24
URB1O60287 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.57■□□□□ 0.24
URB1O60287 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
URB1O60287 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
URB1O60287 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
URB1O60287 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
URB1O60287 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
URB1O60287 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.56■□□□□ 0.24
URB1O60287 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
URB1O60287 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
URB1O60287 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
URB1O60287 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC16.56■□□□□ 0.24
URB1O60287 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.56■□□□□ 0.24
URB1O60287 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
URB1O60287 KLF4P1-201ENST00000412782 1185 ntBASIC16.56■□□□□ 0.24
URB1O60287 SIGLEC30P-201ENST00000455569 941 ntBASIC16.56■□□□□ 0.24
URB1O60287 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
URB1O60287 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.56■□□□□ 0.24
URB1O60287 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
URB1O60287 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
URB1O60287 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.56■□□□□ 0.24
URB1O60287 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.56■□□□□ 0.24
URB1O60287 AC004790.2-201ENST00000623588 572 ntBASIC16.56■□□□□ 0.24
URB1O60287 AC007064.4-201ENST00000637740 555 ntBASIC16.56■□□□□ 0.24
URB1O60287 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.56■□□□□ 0.24
URB1O60287 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
URB1O60287 OR6D1P-202ENST00000641007 5290 ntBASIC16.56■□□□□ 0.24
URB1O60287 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.56■□□□□ 0.24
URB1O60287 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
URB1O60287 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
URB1O60287 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
URB1O60287 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
URB1O60287 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
URB1O60287 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
URB1O60287 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
URB1O60287 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
URB1O60287 AC025580.3-201ENST00000617932 1424 ntBASIC16.56■□□□□ 0.24
URB1O60287 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
URB1O60287 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
URB1O60287 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
URB1O60287 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
URB1O60287 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
URB1O60287 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
URB1O60287 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
URB1O60287 AC236430.1-201ENST00000402231 743 ntBASIC16.56■□□□□ 0.24
URB1O60287 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
URB1O60287 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
URB1O60287 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC16.55■□□□□ 0.24
URB1O60287 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
URB1O60287 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
URB1O60287 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
URB1O60287 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
URB1O60287 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
URB1O60287 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
URB1O60287 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
URB1O60287 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.55■□□□□ 0.24
URB1O60287 BCAR1-209ENST00000546196 1340 ntBASIC16.55■□□□□ 0.24
URB1O60287 AC010460.3-201ENST00000511359 1579 ntBASIC16.55■□□□□ 0.24
URB1O60287 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.55■□□□□ 0.24
URB1O60287 MIR661-201ENST00000384842 89 ntBASIC16.55■□□□□ 0.24
URB1O60287 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.55■□□□□ 0.24
URB1O60287 AL390955.2-201ENST00000603032 514 ntBASIC16.55■□□□□ 0.24
URB1O60287 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
URB1O60287 AL161938.1-201ENST00000569833 2180 ntBASIC16.55■□□□□ 0.24
URB1O60287 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
URB1O60287 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
URB1O60287 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
URB1O60287 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
URB1O60287 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
URB1O60287 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
URB1O60287 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
URB1O60287 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
URB1O60287 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.54■□□□□ 0.24
URB1O60287 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.54■□□□□ 0.24
URB1O60287 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
URB1O60287 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC16.54■□□□□ 0.24
URB1O60287 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.54■□□□□ 0.24
URB1O60287 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.54■□□□□ 0.24
URB1O60287 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.54■□□□□ 0.24
URB1O60287 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
URB1O60287 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.54■□□□□ 0.24
URB1O60287 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.54■□□□□ 0.24
URB1O60287 AC010507.1-201ENST00000633895 436 ntBASIC16.54■□□□□ 0.24
URB1O60287 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
URB1O60287 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
URB1O60287 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
URB1O60287 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
URB1O60287 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
URB1O60287 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.54■□□□□ 0.24
URB1O60287 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.54■□□□□ 0.24
URB1O60287 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC16.54■□□□□ 0.24
URB1O60287 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
URB1O60287 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
URB1O60287 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
URB1O60287 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
URB1O60287 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.54■□□□□ 0.24
URB1O60287 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
URB1O60287 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.54■□□□□ 0.24
URB1O60287 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
URB1O60287 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms