Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.72■□□□□ 0.43
SMAD6O43541 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.72■□□□□ 0.43
SMAD6O43541 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.72■□□□□ 0.43
SMAD6O43541 AC093909.1-201ENST00000504731 1122 ntBASIC17.72■□□□□ 0.43
SMAD6O43541 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.72■□□□□ 0.43
SMAD6O43541 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.72■□□□□ 0.43
SMAD6O43541 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SMAD6O43541 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.72■□□□□ 0.43
SMAD6O43541 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.72■□□□□ 0.43
SMAD6O43541 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMAD6O43541 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMAD6O43541 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMAD6O43541 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMAD6O43541 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SMAD6O43541 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.72■□□□□ 0.43
SMAD6O43541 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.72■□□□□ 0.43
SMAD6O43541 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SMAD6O43541 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SMAD6O43541 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.72■□□□□ 0.43
SMAD6O43541 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.71■□□□□ 0.43
SMAD6O43541 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SMAD6O43541 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMAD6O43541 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMAD6O43541 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMAD6O43541 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SMAD6O43541 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
SMAD6O43541 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SMAD6O43541 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SMAD6O43541 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.71■□□□□ 0.43
SMAD6O43541 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SMAD6O43541 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SMAD6O43541 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMAD6O43541 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SMAD6O43541 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMAD6O43541 NOC2LP2-201ENST00000407594 1944 ntBASIC17.71■□□□□ 0.43
SMAD6O43541 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SMAD6O43541 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
SMAD6O43541 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMAD6O43541 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.71■□□□□ 0.43
SMAD6O43541 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.71■□□□□ 0.43
SMAD6O43541 LAGE3P1-201ENST00000425356 484 ntBASIC17.71■□□□□ 0.43
SMAD6O43541 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.71■□□□□ 0.43
SMAD6O43541 SLC25A1P1-201ENST00000528351 927 ntBASIC17.71■□□□□ 0.43
SMAD6O43541 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.71■□□□□ 0.43
SMAD6O43541 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.71■□□□□ 0.43
SMAD6O43541 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.71■□□□□ 0.43
SMAD6O43541 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMAD6O43541 HLA-J-201ENST00000462773 1622 ntBASIC17.71■□□□□ 0.43
SMAD6O43541 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMAD6O43541 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMAD6O43541 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
SMAD6O43541 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SMAD6O43541 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SMAD6O43541 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.7■□□□□ 0.42
SMAD6O43541 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.7■□□□□ 0.42
SMAD6O43541 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SMAD6O43541 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SMAD6O43541 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SMAD6O43541 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMAD6O43541 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.7■□□□□ 0.42
SMAD6O43541 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SMAD6O43541 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SMAD6O43541 AL022342.1-201ENST00000400363 863 ntBASIC17.7■□□□□ 0.42
SMAD6O43541 AC092910.1-201ENST00000482027 1129 ntBASIC17.7■□□□□ 0.42
SMAD6O43541 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.7■□□□□ 0.42
SMAD6O43541 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.7■□□□□ 0.42
SMAD6O43541 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.7■□□□□ 0.42
SMAD6O43541 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMAD6O43541 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.7■□□□□ 0.42
SMAD6O43541 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMAD6O43541 AL139327.4-201ENST00000612362 153 ntBASIC17.7■□□□□ 0.42
SMAD6O43541 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMAD6O43541 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMAD6O43541 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
SMAD6O43541 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMAD6O43541 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMAD6O43541 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SMAD6O43541 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMAD6O43541 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
SMAD6O43541 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMAD6O43541 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMAD6O43541 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
SMAD6O43541 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SMAD6O43541 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.69■□□□□ 0.42
SMAD6O43541 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
SMAD6O43541 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SMAD6O43541 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.69■□□□□ 0.42
SMAD6O43541 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.69■□□□□ 0.42
SMAD6O43541 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMAD6O43541 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMAD6O43541 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMAD6O43541 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMAD6O43541 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.69■□□□□ 0.42
SMAD6O43541 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.69■□□□□ 0.42
SMAD6O43541 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.69■□□□□ 0.42
SMAD6O43541 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.69■□□□□ 0.42
SMAD6O43541 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.69■□□□□ 0.42
SMAD6O43541 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.69■□□□□ 0.42
SMAD6O43541 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SMAD6O43541 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms