Protein–RNA interactions for Protein: O15499

GSC2, Homeobox protein goosecoid-2, humanhuman

Predictions only

Length 205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSC2O15499 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
GSC2O15499 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GSC2O15499 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GSC2O15499 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GSC2O15499 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
GSC2O15499 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
GSC2O15499 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GSC2O15499 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
GSC2O15499 KRT8P9-201ENST00000558927 1449 ntBASIC16.91■□□□□ 0.3
GSC2O15499 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GSC2O15499 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
GSC2O15499 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC16.91■□□□□ 0.3
GSC2O15499 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GSC2O15499 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
GSC2O15499 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GSC2O15499 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC16.91■□□□□ 0.3
GSC2O15499 KRASP1-201ENST00000407852 552 ntBASIC16.91■□□□□ 0.3
GSC2O15499 NCF1B-203ENST00000435988 1254 ntBASIC16.91■□□□□ 0.3
GSC2O15499 TSPY6P-201ENST00000448518 926 ntBASIC16.91■□□□□ 0.3
GSC2O15499 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC16.91■□□□□ 0.3
GSC2O15499 AC008403.3-201ENST00000598924 454 ntBASIC16.91■□□□□ 0.3
GSC2O15499 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.91■□□□□ 0.3
GSC2O15499 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GSC2O15499 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
GSC2O15499 AL031985.4-201ENST00000642138 673 ntBASIC16.91■□□□□ 0.3
GSC2O15499 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
GSC2O15499 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.91■□□□□ 0.3
GSC2O15499 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
GSC2O15499 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.91■□□□□ 0.3
GSC2O15499 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GSC2O15499 AC023824.1-201ENST00000562945 2975 ntBASIC16.91■□□□□ 0.3
GSC2O15499 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.91■□□□□ 0.3
GSC2O15499 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GSC2O15499 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GSC2O15499 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GSC2O15499 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GSC2O15499 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GSC2O15499 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GSC2O15499 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GSC2O15499 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GSC2O15499 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GSC2O15499 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GSC2O15499 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GSC2O15499 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GSC2O15499 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GSC2O15499 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GSC2O15499 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
GSC2O15499 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
GSC2O15499 AP002982.1-201ENST00000492365 877 ntBASIC16.9■□□□□ 0.3
GSC2O15499 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
GSC2O15499 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC16.9■□□□□ 0.3
GSC2O15499 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
GSC2O15499 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.9■□□□□ 0.3
GSC2O15499 AL023875.1-201ENST00000640777 796 ntBASIC16.9■□□□□ 0.3
GSC2O15499 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GSC2O15499 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GSC2O15499 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
GSC2O15499 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GSC2O15499 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.9■□□□□ 0.3
GSC2O15499 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
GSC2O15499 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
GSC2O15499 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
GSC2O15499 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GSC2O15499 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
GSC2O15499 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.9■□□□□ 0.3
GSC2O15499 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
GSC2O15499 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.9■□□□□ 0.3
GSC2O15499 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.3
GSC2O15499 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
GSC2O15499 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
GSC2O15499 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
GSC2O15499 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.89■□□□□ 0.29
GSC2O15499 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GSC2O15499 KRT16P1-201ENST00000399124 1418 ntBASIC16.89■□□□□ 0.29
GSC2O15499 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.89■□□□□ 0.29
GSC2O15499 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
GSC2O15499 AC092364.2-201ENST00000596710 2692 ntBASIC16.89■□□□□ 0.29
GSC2O15499 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
GSC2O15499 AL365203.3-201ENST00000609742 2057 ntBASIC16.89■□□□□ 0.29
GSC2O15499 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.89■□□□□ 0.29
GSC2O15499 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GSC2O15499 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
GSC2O15499 SLC25A1P3-201ENST00000395415 828 ntBASIC16.89■□□□□ 0.29
GSC2O15499 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GSC2O15499 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.89■□□□□ 0.29
GSC2O15499 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.89■□□□□ 0.29
GSC2O15499 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC16.89■□□□□ 0.29
GSC2O15499 MIR3180-4-201ENST00000582223 153 ntBASIC16.89■□□□□ 0.29
GSC2O15499 MIR4674-201ENST00000582457 87 ntBASIC16.89■□□□□ 0.29
GSC2O15499 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC16.89■□□□□ 0.29
GSC2O15499 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GSC2O15499 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GSC2O15499 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GSC2O15499 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GSC2O15499 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.89■□□□□ 0.29
GSC2O15499 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
GSC2O15499 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
GSC2O15499 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
GSC2O15499 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GSC2O15499 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms