Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRANK1O15050 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRANK1O15050 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC18.26■□□□□ 0.51
TRANK1O15050 MIR1909-201ENST00000411312 80 ntBASIC18.26■□□□□ 0.51
TRANK1O15050 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.26■□□□□ 0.51
TRANK1O15050 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.26■□□□□ 0.51
TRANK1O15050 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TRANK1O15050 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.26■□□□□ 0.51
TRANK1O15050 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.26■□□□□ 0.51
TRANK1O15050 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.26■□□□□ 0.51
TRANK1O15050 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRANK1O15050 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
TRANK1O15050 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRANK1O15050 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.26■□□□□ 0.51
TRANK1O15050 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.26■□□□□ 0.51
TRANK1O15050 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRANK1O15050 AL031598.1-201ENST00000561511 1773 ntBASIC18.26■□□□□ 0.51
TRANK1O15050 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRANK1O15050 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRANK1O15050 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRANK1O15050 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRANK1O15050 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRANK1O15050 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRANK1O15050 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC18.26■□□□□ 0.51
TRANK1O15050 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TRANK1O15050 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC18.26■□□□□ 0.51
TRANK1O15050 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC18.26■□□□□ 0.51
TRANK1O15050 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRANK1O15050 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.25■□□□□ 0.51
TRANK1O15050 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.25■□□□□ 0.51
TRANK1O15050 AL513480.1-201ENST00000451731 511 ntBASIC18.25■□□□□ 0.51
TRANK1O15050 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRANK1O15050 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRANK1O15050 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TRANK1O15050 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.25■□□□□ 0.51
TRANK1O15050 AC022144.1-201ENST00000602255 1580 ntBASIC18.25■□□□□ 0.51
TRANK1O15050 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRANK1O15050 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRANK1O15050 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRANK1O15050 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRANK1O15050 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.25■□□□□ 0.51
TRANK1O15050 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRANK1O15050 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC18.25■□□□□ 0.51
TRANK1O15050 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRANK1O15050 AL671277.1-201ENST00000429656 993 ntBASIC18.25■□□□□ 0.51
TRANK1O15050 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC18.25■□□□□ 0.51
TRANK1O15050 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC18.25■□□□□ 0.51
TRANK1O15050 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRANK1O15050 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRANK1O15050 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRANK1O15050 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRANK1O15050 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRANK1O15050 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.24■□□□□ 0.51
TRANK1O15050 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.24■□□□□ 0.51
TRANK1O15050 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.24■□□□□ 0.51
TRANK1O15050 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC18.24■□□□□ 0.51
TRANK1O15050 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.24■□□□□ 0.51
TRANK1O15050 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC18.24■□□□□ 0.51
TRANK1O15050 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.24■□□□□ 0.51
TRANK1O15050 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRANK1O15050 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.24■□□□□ 0.51
TRANK1O15050 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.24■□□□□ 0.51
TRANK1O15050 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TRANK1O15050 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRANK1O15050 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.24■□□□□ 0.51
TRANK1O15050 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.24■□□□□ 0.51
TRANK1O15050 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TRANK1O15050 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC18.24■□□□□ 0.51
TRANK1O15050 AC116407.2-201ENST00000613639 860 ntBASIC18.24■□□□□ 0.51
TRANK1O15050 REXO1L11P-201ENST00000620964 1927 ntBASIC18.24■□□□□ 0.51
TRANK1O15050 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.24■□□□□ 0.51
TRANK1O15050 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
TRANK1O15050 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRANK1O15050 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.23■□□□□ 0.51
TRANK1O15050 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRANK1O15050 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRANK1O15050 TSSK5P-201ENST00000423978 907 ntBASIC18.23■□□□□ 0.51
TRANK1O15050 SPCS2P4-201ENST00000436160 681 ntBASIC18.23■□□□□ 0.51
TRANK1O15050 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC18.23■□□□□ 0.51
TRANK1O15050 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.23■□□□□ 0.51
TRANK1O15050 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.23■□□□□ 0.51
TRANK1O15050 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.23■□□□□ 0.51
TRANK1O15050 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.23■□□□□ 0.51
TRANK1O15050 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRANK1O15050 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRANK1O15050 SLC25A6P2-201ENST00000497974 877 ntBASIC18.23■□□□□ 0.51
TRANK1O15050 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.23■□□□□ 0.51
TRANK1O15050 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC18.23■□□□□ 0.51
TRANK1O15050 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
TRANK1O15050 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.23■□□□□ 0.51
TRANK1O15050 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
TRANK1O15050 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRANK1O15050 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.23■□□□□ 0.51
TRANK1O15050 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRANK1O15050 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.23■□□□□ 0.51
TRANK1O15050 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRANK1O15050 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.23■□□□□ 0.51
TRANK1O15050 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC18.22■□□□□ 0.51
TRANK1O15050 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC18.22■□□□□ 0.51
TRANK1O15050 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms