Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM49D1C9J1S8 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM49D1C9J1S8 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM49D1C9J1S8 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM49D1C9J1S8 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM49D1C9J1S8 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
TRIM49D1C9J1S8 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TRIM49D1C9J1S8 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM49D1C9J1S8 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM49D1C9J1S8 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM49D1C9J1S8 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM49D1C9J1S8 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.61■□□□□ 0.41
TRIM49D1C9J1S8 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM49D1C9J1S8 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.61■□□□□ 0.41
TRIM49D1C9J1S8 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM49D1C9J1S8 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.61■□□□□ 0.41
TRIM49D1C9J1S8 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM49D1C9J1S8 RASA4DP-201ENST00000460726 1199 ntBASIC17.61■□□□□ 0.41
TRIM49D1C9J1S8 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.61■□□□□ 0.41
TRIM49D1C9J1S8 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.61■□□□□ 0.41
TRIM49D1C9J1S8 MIR4497-201ENST00000583208 89 ntBASIC17.61■□□□□ 0.41
TRIM49D1C9J1S8 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.61■□□□□ 0.41
TRIM49D1C9J1S8 AL136038.4-201ENST00000603606 1261 ntBASIC17.61■□□□□ 0.41
TRIM49D1C9J1S8 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.61■□□□□ 0.41
TRIM49D1C9J1S8 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.61■□□□□ 0.41
TRIM49D1C9J1S8 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM49D1C9J1S8 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM49D1C9J1S8 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM49D1C9J1S8 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
TRIM49D1C9J1S8 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM49D1C9J1S8 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM49D1C9J1S8 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM49D1C9J1S8 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.61■□□□□ 0.41
TRIM49D1C9J1S8 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TRIM49D1C9J1S8 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.61■□□□□ 0.41
TRIM49D1C9J1S8 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TRIM49D1C9J1S8 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM49D1C9J1S8 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM49D1C9J1S8 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM49D1C9J1S8 AC018695.7-201ENST00000624587 2492 ntBASIC17.6■□□□□ 0.41
TRIM49D1C9J1S8 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TRIM49D1C9J1S8 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM49D1C9J1S8 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM49D1C9J1S8 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.6■□□□□ 0.41
TRIM49D1C9J1S8 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TRIM49D1C9J1S8 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
TRIM49D1C9J1S8 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM49D1C9J1S8 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.6■□□□□ 0.41
TRIM49D1C9J1S8 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.6■□□□□ 0.41
TRIM49D1C9J1S8 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.6■□□□□ 0.41
TRIM49D1C9J1S8 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM49D1C9J1S8 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.6■□□□□ 0.41
TRIM49D1C9J1S8 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM49D1C9J1S8 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM49D1C9J1S8 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.6■□□□□ 0.41
TRIM49D1C9J1S8 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.6■□□□□ 0.41
TRIM49D1C9J1S8 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.6■□□□□ 0.41
TRIM49D1C9J1S8 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
TRIM49D1C9J1S8 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM49D1C9J1S8 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.6■□□□□ 0.41
TRIM49D1C9J1S8 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.6■□□□□ 0.41
TRIM49D1C9J1S8 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM49D1C9J1S8 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM49D1C9J1S8 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM49D1C9J1S8 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.6■□□□□ 0.41
TRIM49D1C9J1S8 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.6■□□□□ 0.41
TRIM49D1C9J1S8 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM49D1C9J1S8 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
TRIM49D1C9J1S8 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM49D1C9J1S8 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
TRIM49D1C9J1S8 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM49D1C9J1S8 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM49D1C9J1S8 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
TRIM49D1C9J1S8 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM49D1C9J1S8 PCDHB19P-201ENST00000570871 2371 ntBASIC17.6■□□□□ 0.41
TRIM49D1C9J1S8 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM49D1C9J1S8 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
TRIM49D1C9J1S8 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM49D1C9J1S8 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.6■□□□□ 0.41
TRIM49D1C9J1S8 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM49D1C9J1S8 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM49D1C9J1S8 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
TRIM49D1C9J1S8 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM49D1C9J1S8 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM49D1C9J1S8 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM49D1C9J1S8 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
TRIM49D1C9J1S8 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM49D1C9J1S8 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM49D1C9J1S8 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM49D1C9J1S8 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.59■□□□□ 0.41
TRIM49D1C9J1S8 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM49D1C9J1S8 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
TRIM49D1C9J1S8 AC005915.1-201ENST00000624912 2018 ntBASIC17.59■□□□□ 0.41
TRIM49D1C9J1S8 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM49D1C9J1S8 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM49D1C9J1S8 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
TRIM49D1C9J1S8 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM49D1C9J1S8 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.59■□□□□ 0.41
TRIM49D1C9J1S8 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
TRIM49D1C9J1S8 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms