Protein–RNA interactions for Protein: A0A0C4DFX4

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 3,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A0C4DFX4 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.05■□□□□ 0.48
A0A0C4DFX4 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
A0A0C4DFX4 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
A0A0C4DFX4 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
A0A0C4DFX4 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
A0A0C4DFX4 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
A0A0C4DFX4 DFFBP1-201ENST00000433250 979 ntBASIC18.04■□□□□ 0.48
A0A0C4DFX4 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.04■□□□□ 0.48
A0A0C4DFX4 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC18.04■□□□□ 0.48
A0A0C4DFX4 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
A0A0C4DFX4 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC18.04■□□□□ 0.48
A0A0C4DFX4 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.04■□□□□ 0.48
A0A0C4DFX4 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC18.04■□□□□ 0.48
A0A0C4DFX4 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC18.04■□□□□ 0.48
A0A0C4DFX4 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.04■□□□□ 0.48
A0A0C4DFX4 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.04■□□□□ 0.48
A0A0C4DFX4 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC18.04■□□□□ 0.48
A0A0C4DFX4 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
A0A0C4DFX4 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
A0A0C4DFX4 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
A0A0C4DFX4 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.04■□□□□ 0.48
A0A0C4DFX4 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
A0A0C4DFX4 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.04■□□□□ 0.48
A0A0C4DFX4 MIR3615-201ENST00000581999 87 ntBASIC18.04■□□□□ 0.48
A0A0C4DFX4 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
A0A0C4DFX4 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
A0A0C4DFX4 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.04■□□□□ 0.48
A0A0C4DFX4 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
A0A0C4DFX4 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
A0A0C4DFX4 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
A0A0C4DFX4 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.04■□□□□ 0.48
A0A0C4DFX4 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
A0A0C4DFX4 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
A0A0C4DFX4 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.04■□□□□ 0.48
A0A0C4DFX4 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
A0A0C4DFX4 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
A0A0C4DFX4 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
A0A0C4DFX4 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
A0A0C4DFX4 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.04■□□□□ 0.48
A0A0C4DFX4 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.04■□□□□ 0.48
A0A0C4DFX4 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
A0A0C4DFX4 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
A0A0C4DFX4 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.03■□□□□ 0.48
A0A0C4DFX4 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
A0A0C4DFX4 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.03■□□□□ 0.48
A0A0C4DFX4 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
A0A0C4DFX4 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
A0A0C4DFX4 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
A0A0C4DFX4 FEM1AP3-201ENST00000403722 1741 ntBASIC18.03■□□□□ 0.48
A0A0C4DFX4 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
A0A0C4DFX4 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
A0A0C4DFX4 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
A0A0C4DFX4 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
A0A0C4DFX4 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
A0A0C4DFX4 AL355334.1-201ENST00000417713 215 ntBASIC18.03■□□□□ 0.48
A0A0C4DFX4 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
A0A0C4DFX4 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.03■□□□□ 0.48
A0A0C4DFX4 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
A0A0C4DFX4 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.03■□□□□ 0.48
A0A0C4DFX4 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
A0A0C4DFX4 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.03■□□□□ 0.48
A0A0C4DFX4 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.03■□□□□ 0.48
A0A0C4DFX4 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
A0A0C4DFX4 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
A0A0C4DFX4 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
A0A0C4DFX4 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
A0A0C4DFX4 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
A0A0C4DFX4 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
A0A0C4DFX4 AL353593.2-201ENST00000602529 1483 ntBASIC18.02■□□□□ 0.48
A0A0C4DFX4 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
A0A0C4DFX4 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
A0A0C4DFX4 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.02■□□□□ 0.48
A0A0C4DFX4 AC140658.5-201ENST00000438532 169 ntBASIC18.02■□□□□ 0.48
A0A0C4DFX4 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC18.02■□□□□ 0.48
A0A0C4DFX4 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC18.02■□□□□ 0.48
A0A0C4DFX4 AC106872.11-201ENST00000605838 421 ntBASIC18.02■□□□□ 0.48
A0A0C4DFX4 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
A0A0C4DFX4 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC18.02■□□□□ 0.48
A0A0C4DFX4 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
A0A0C4DFX4 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
A0A0C4DFX4 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
A0A0C4DFX4 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.02■□□□□ 0.48
A0A0C4DFX4 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
A0A0C4DFX4 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.02■□□□□ 0.48
A0A0C4DFX4 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.02■□□□□ 0.48
A0A0C4DFX4 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
A0A0C4DFX4 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC18.02■□□□□ 0.48
A0A0C4DFX4 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.02■□□□□ 0.48
A0A0C4DFX4 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
A0A0C4DFX4 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.47
A0A0C4DFX4 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
A0A0C4DFX4 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
A0A0C4DFX4 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
A0A0C4DFX4 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.02■□□□□ 0.47
A0A0C4DFX4 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
A0A0C4DFX4 MIR149-201ENST00000384879 89 ntBASIC18.02■□□□□ 0.47
A0A0C4DFX4 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
A0A0C4DFX4 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.02■□□□□ 0.47
A0A0C4DFX4 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
A0A0C4DFX4 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms