Protein–RNA interactions for Protein: Q9UQR0

SCML2, Sex comb on midleg-like protein 2, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML2Q9UQR0 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCML2Q9UQR0 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCML2Q9UQR0 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.25■□□□□ 0.51
SCML2Q9UQR0 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCML2Q9UQR0 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCML2Q9UQR0 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.25■□□□□ 0.51
SCML2Q9UQR0 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SCML2Q9UQR0 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.25■□□□□ 0.51
SCML2Q9UQR0 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.25■□□□□ 0.51
SCML2Q9UQR0 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.25■□□□□ 0.51
SCML2Q9UQR0 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
SCML2Q9UQR0 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SCML2Q9UQR0 AC097637.2-201ENST00000624096 1997 ntBASIC18.24■□□□□ 0.51
SCML2Q9UQR0 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.24■□□□□ 0.51
SCML2Q9UQR0 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SCML2Q9UQR0 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SCML2Q9UQR0 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.24■□□□□ 0.51
SCML2Q9UQR0 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.24■□□□□ 0.51
SCML2Q9UQR0 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SCML2Q9UQR0 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.24■□□□□ 0.51
SCML2Q9UQR0 IGHV3-22-201ENST00000520721 359 ntBASIC18.24■□□□□ 0.51
SCML2Q9UQR0 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SCML2Q9UQR0 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.24■□□□□ 0.51
SCML2Q9UQR0 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.24■□□□□ 0.51
SCML2Q9UQR0 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
SCML2Q9UQR0 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.24■□□□□ 0.51
SCML2Q9UQR0 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
SCML2Q9UQR0 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.24■□□□□ 0.51
SCML2Q9UQR0 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SCML2Q9UQR0 AP002414.3-201ENST00000589352 1468 ntBASIC18.24■□□□□ 0.51
SCML2Q9UQR0 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.24■□□□□ 0.51
SCML2Q9UQR0 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
SCML2Q9UQR0 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SCML2Q9UQR0 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.24■□□□□ 0.51
SCML2Q9UQR0 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SCML2Q9UQR0 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.23■□□□□ 0.51
SCML2Q9UQR0 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.23■□□□□ 0.51
SCML2Q9UQR0 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SCML2Q9UQR0 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.23■□□□□ 0.51
SCML2Q9UQR0 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SCML2Q9UQR0 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SCML2Q9UQR0 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SCML2Q9UQR0 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SCML2Q9UQR0 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SCML2Q9UQR0 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.23■□□□□ 0.51
SCML2Q9UQR0 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SCML2Q9UQR0 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.23■□□□□ 0.51
SCML2Q9UQR0 AC073621.1-201ENST00000392730 636 ntBASIC18.23■□□□□ 0.51
SCML2Q9UQR0 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.23■□□□□ 0.51
SCML2Q9UQR0 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.23■□□□□ 0.51
SCML2Q9UQR0 AC092910.1-201ENST00000482027 1129 ntBASIC18.23■□□□□ 0.51
SCML2Q9UQR0 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SCML2Q9UQR0 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.23■□□□□ 0.51
SCML2Q9UQR0 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.23■□□□□ 0.51
SCML2Q9UQR0 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.23■□□□□ 0.51
SCML2Q9UQR0 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.23■□□□□ 0.51
SCML2Q9UQR0 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.23■□□□□ 0.51
SCML2Q9UQR0 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.23■□□□□ 0.51
SCML2Q9UQR0 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SCML2Q9UQR0 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SCML2Q9UQR0 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SCML2Q9UQR0 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SCML2Q9UQR0 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SCML2Q9UQR0 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SCML2Q9UQR0 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.23■□□□□ 0.51
SCML2Q9UQR0 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
SCML2Q9UQR0 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SCML2Q9UQR0 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SCML2Q9UQR0 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SCML2Q9UQR0 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SCML2Q9UQR0 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SCML2Q9UQR0 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
SCML2Q9UQR0 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SCML2Q9UQR0 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCML2Q9UQR0 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.22■□□□□ 0.51
SCML2Q9UQR0 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
SCML2Q9UQR0 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SCML2Q9UQR0 LYSMD4-203ENST00000378904 2122 ntBASIC18.22■□□□□ 0.51
SCML2Q9UQR0 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCML2Q9UQR0 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SCML2Q9UQR0 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCML2Q9UQR0 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SCML2Q9UQR0 NOC2LP2-201ENST00000407594 1944 ntBASIC18.22■□□□□ 0.51
SCML2Q9UQR0 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCML2Q9UQR0 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.22■□□□□ 0.51
SCML2Q9UQR0 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCML2Q9UQR0 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SCML2Q9UQR0 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCML2Q9UQR0 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.22■□□□□ 0.51
SCML2Q9UQR0 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.22■□□□□ 0.51
SCML2Q9UQR0 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.22■□□□□ 0.51
SCML2Q9UQR0 AC098831.1-202ENST00000438821 336 ntBASIC18.22■□□□□ 0.51
SCML2Q9UQR0 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.22■□□□□ 0.51
SCML2Q9UQR0 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.22■□□□□ 0.51
SCML2Q9UQR0 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.22■□□□□ 0.51
SCML2Q9UQR0 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.22■□□□□ 0.51
SCML2Q9UQR0 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.22■□□□□ 0.51
SCML2Q9UQR0 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.22■□□□□ 0.51
SCML2Q9UQR0 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCML2Q9UQR0 AL356488.2-201ENST00000602755 427 ntBASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms