Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.64■□□□□ 0.73
CBX8Q9HC52 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CBX8Q9HC52 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CBX8Q9HC52 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.64■□□□□ 0.73
CBX8Q9HC52 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CBX8Q9HC52 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.64■□□□□ 0.73
CBX8Q9HC52 AC142381.4-202ENST00000563973 229 ntBASIC19.64■□□□□ 0.73
CBX8Q9HC52 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.64■□□□□ 0.73
CBX8Q9HC52 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.64■□□□□ 0.73
CBX8Q9HC52 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.64■□□□□ 0.73
CBX8Q9HC52 AL139327.4-201ENST00000612362 153 ntBASIC19.64■□□□□ 0.73
CBX8Q9HC52 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.64■□□□□ 0.73
CBX8Q9HC52 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CBX8Q9HC52 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CBX8Q9HC52 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CBX8Q9HC52 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CBX8Q9HC52 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CBX8Q9HC52 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
CBX8Q9HC52 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CBX8Q9HC52 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CBX8Q9HC52 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CBX8Q9HC52 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CBX8Q9HC52 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CBX8Q9HC52 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CBX8Q9HC52 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CBX8Q9HC52 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.63■□□□□ 0.73
CBX8Q9HC52 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CBX8Q9HC52 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CBX8Q9HC52 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CBX8Q9HC52 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CBX8Q9HC52 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CBX8Q9HC52 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CBX8Q9HC52 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.63■□□□□ 0.73
CBX8Q9HC52 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.63■□□□□ 0.73
CBX8Q9HC52 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CBX8Q9HC52 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CBX8Q9HC52 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CBX8Q9HC52 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CBX8Q9HC52 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.63■□□□□ 0.73
CBX8Q9HC52 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
CBX8Q9HC52 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CBX8Q9HC52 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.63■□□□□ 0.73
CBX8Q9HC52 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CBX8Q9HC52 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CBX8Q9HC52 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
CBX8Q9HC52 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CBX8Q9HC52 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.63■□□□□ 0.73
CBX8Q9HC52 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC19.63■□□□□ 0.73
CBX8Q9HC52 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CBX8Q9HC52 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CBX8Q9HC52 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CBX8Q9HC52 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CBX8Q9HC52 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CBX8Q9HC52 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CBX8Q9HC52 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CBX8Q9HC52 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CBX8Q9HC52 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CBX8Q9HC52 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CBX8Q9HC52 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CBX8Q9HC52 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CBX8Q9HC52 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.62■□□□□ 0.73
CBX8Q9HC52 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CBX8Q9HC52 UBE2SP1-201ENST00000450587 669 ntBASIC19.62■□□□□ 0.73
CBX8Q9HC52 AC098590.1-201ENST00000468126 897 ntBASIC19.62■□□□□ 0.73
CBX8Q9HC52 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.62■□□□□ 0.73
CBX8Q9HC52 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.62■□□□□ 0.73
CBX8Q9HC52 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CBX8Q9HC52 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.62■□□□□ 0.73
CBX8Q9HC52 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC19.62■□□□□ 0.73
CBX8Q9HC52 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CBX8Q9HC52 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CBX8Q9HC52 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CBX8Q9HC52 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC19.62■□□□□ 0.73
CBX8Q9HC52 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CBX8Q9HC52 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CBX8Q9HC52 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CBX8Q9HC52 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CBX8Q9HC52 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CBX8Q9HC52 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CBX8Q9HC52 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CBX8Q9HC52 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC19.61■□□□□ 0.73
CBX8Q9HC52 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CBX8Q9HC52 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC19.61■□□□□ 0.73
CBX8Q9HC52 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC19.61■□□□□ 0.73
CBX8Q9HC52 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CBX8Q9HC52 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC19.61■□□□□ 0.73
CBX8Q9HC52 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CBX8Q9HC52 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CBX8Q9HC52 TSPY14P-201ENST00000303979 915 ntBASIC19.61■□□□□ 0.73
CBX8Q9HC52 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CBX8Q9HC52 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CBX8Q9HC52 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CBX8Q9HC52 MIR1238-201ENST00000408483 83 ntBASIC19.61■□□□□ 0.73
CBX8Q9HC52 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.61■□□□□ 0.73
CBX8Q9HC52 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.61■□□□□ 0.73
CBX8Q9HC52 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.61■□□□□ 0.73
CBX8Q9HC52 Z99916.2-201ENST00000604037 246 ntBASIC19.61■□□□□ 0.73
CBX8Q9HC52 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.61■□□□□ 0.73
CBX8Q9HC52 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.61■□□□□ 0.73
CBX8Q9HC52 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms