Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC11.71□□□□□ -0.54
LITAFQ99732 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LITAFQ99732 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LITAFQ99732 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LITAFQ99732 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LITAFQ99732 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC11.71□□□□□ -0.54
LITAFQ99732 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
LITAFQ99732 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LITAFQ99732 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC11.71□□□□□ -0.54
LITAFQ99732 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LITAFQ99732 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
LITAFQ99732 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC11.7□□□□□ -0.54
LITAFQ99732 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LITAFQ99732 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
LITAFQ99732 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
LITAFQ99732 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LITAFQ99732 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LITAFQ99732 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC11.7□□□□□ -0.54
LITAFQ99732 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
LITAFQ99732 VILL-207ENST00000465644 1857 ntTSL 5 BASIC11.7□□□□□ -0.54
LITAFQ99732 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC11.7□□□□□ -0.54
LITAFQ99732 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
LITAFQ99732 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LITAFQ99732 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
LITAFQ99732 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LITAFQ99732 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
LITAFQ99732 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
LITAFQ99732 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
LITAFQ99732 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LITAFQ99732 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC11.7□□□□□ -0.54
LITAFQ99732 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
LITAFQ99732 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC11.7□□□□□ -0.54
LITAFQ99732 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC11.7□□□□□ -0.54
LITAFQ99732 AC130371.2-201ENST00000619443 611 ntBASIC11.7□□□□□ -0.54
LITAFQ99732 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LITAFQ99732 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LITAFQ99732 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LITAFQ99732 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LITAFQ99732 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LITAFQ99732 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LITAFQ99732 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LITAFQ99732 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC11.7□□□□□ -0.54
LITAFQ99732 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LITAFQ99732 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC11.7□□□□□ -0.54
LITAFQ99732 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC11.7□□□□□ -0.54
LITAFQ99732 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LITAFQ99732 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LITAFQ99732 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LITAFQ99732 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LITAFQ99732 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC11.7□□□□□ -0.54
LITAFQ99732 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
LITAFQ99732 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LITAFQ99732 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LITAFQ99732 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC11.69□□□□□ -0.54
LITAFQ99732 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LITAFQ99732 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC11.69□□□□□ -0.54
LITAFQ99732 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LITAFQ99732 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LITAFQ99732 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LITAFQ99732 AC144831.1-201ENST00000573312 2656 ntBASIC11.69□□□□□ -0.54
LITAFQ99732 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC11.69□□□□□ -0.54
LITAFQ99732 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LITAFQ99732 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LITAFQ99732 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
LITAFQ99732 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC11.69□□□□□ -0.54
LITAFQ99732 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LITAFQ99732 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
LITAFQ99732 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
LITAFQ99732 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LITAFQ99732 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LITAFQ99732 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC11.69□□□□□ -0.54
LITAFQ99732 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC11.69□□□□□ -0.54
LITAFQ99732 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC11.69□□□□□ -0.54
LITAFQ99732 MIR3180-4-201ENST00000582223 153 ntBASIC11.69□□□□□ -0.54
LITAFQ99732 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC11.69□□□□□ -0.54
LITAFQ99732 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC11.69□□□□□ -0.54
LITAFQ99732 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC11.69□□□□□ -0.54
LITAFQ99732 AC083880.1-201ENST00000608266 535 ntBASIC11.69□□□□□ -0.54
LITAFQ99732 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC11.69□□□□□ -0.54
LITAFQ99732 MIR6821-201ENST00000617625 74 ntBASIC11.69□□□□□ -0.54
LITAFQ99732 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LITAFQ99732 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
LITAFQ99732 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC11.69□□□□□ -0.54
LITAFQ99732 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LITAFQ99732 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC11.69□□□□□ -0.54
LITAFQ99732 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC11.69□□□□□ -0.54
LITAFQ99732 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LITAFQ99732 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
LITAFQ99732 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC11.69□□□□□ -0.54
LITAFQ99732 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LITAFQ99732 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LITAFQ99732 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LITAFQ99732 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LITAFQ99732 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LITAFQ99732 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LITAFQ99732 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC11.69□□□□□ -0.54
LITAFQ99732 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
LITAFQ99732 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
LITAFQ99732 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LITAFQ99732 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms