Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 MIR3180-4-201ENST00000582223 153 ntBASIC13.46□□□□□ -0.25
LINC00479Q96M42 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC13.46□□□□□ -0.25
LINC00479Q96M42 CD177P1-201ENST00000606252 935 ntBASIC13.46□□□□□ -0.25
LINC00479Q96M42 DGCR10-201ENST00000609839 495 ntBASIC13.46□□□□□ -0.25
LINC00479Q96M42 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00479Q96M42 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00479Q96M42 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00479Q96M42 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00479Q96M42 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00479Q96M42 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00479Q96M42 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
LINC00479Q96M42 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
LINC00479Q96M42 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LINC00479Q96M42 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
LINC00479Q96M42 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
LINC00479Q96M42 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LINC00479Q96M42 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
LINC00479Q96M42 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00479Q96M42 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00479Q96M42 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00479Q96M42 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00479Q96M42 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC13.45□□□□□ -0.26
LINC00479Q96M42 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC13.45□□□□□ -0.26
LINC00479Q96M42 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00479Q96M42 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
LINC00479Q96M42 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00479Q96M42 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
LINC00479Q96M42 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC13.45□□□□□ -0.26
LINC00479Q96M42 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00479Q96M42 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00479Q96M42 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00479Q96M42 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00479Q96M42 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00479Q96M42 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
LINC00479Q96M42 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00479Q96M42 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00479Q96M42 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC13.45□□□□□ -0.26
LINC00479Q96M42 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00479Q96M42 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00479Q96M42 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00479Q96M42 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00479Q96M42 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00479Q96M42 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00479Q96M42 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC13.45□□□□□ -0.26
LINC00479Q96M42 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC13.45□□□□□ -0.26
LINC00479Q96M42 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00479Q96M42 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC13.45□□□□□ -0.26
LINC00479Q96M42 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC13.45□□□□□ -0.26
LINC00479Q96M42 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC13.45□□□□□ -0.26
LINC00479Q96M42 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00479Q96M42 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC13.45□□□□□ -0.26
LINC00479Q96M42 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00479Q96M42 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00479Q96M42 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00479Q96M42 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
LINC00479Q96M42 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00479Q96M42 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00479Q96M42 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC13.45□□□□□ -0.26
LINC00479Q96M42 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00479Q96M42 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
LINC00479Q96M42 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00479Q96M42 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00479Q96M42 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00479Q96M42 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC13.45□□□□□ -0.26
LINC00479Q96M42 LYSMD4-203ENST00000378904 2122 ntBASIC13.45□□□□□ -0.26
LINC00479Q96M42 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00479Q96M42 RHBDF1P1-201ENST00000427504 1941 ntBASIC13.45□□□□□ -0.26
LINC00479Q96M42 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
LINC00479Q96M42 LINC00554-201ENST00000564841 3011 ntBASIC13.45□□□□□ -0.26
LINC00479Q96M42 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00479Q96M42 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
LINC00479Q96M42 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00479Q96M42 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00479Q96M42 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00479Q96M42 RNF216P1-203ENST00000404404 2427 ntBASIC13.44□□□□□ -0.26
LINC00479Q96M42 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00479Q96M42 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC13.44□□□□□ -0.26
LINC00479Q96M42 SRI-203ENST00000419179 1307 ntTSL 2 BASIC13.44□□□□□ -0.26
LINC00479Q96M42 AC116353.5-201ENST00000638148 1699 ntBASIC13.44□□□□□ -0.26
LINC00479Q96M42 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00479Q96M42 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00479Q96M42 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00479Q96M42 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00479Q96M42 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00479Q96M42 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00479Q96M42 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00479Q96M42 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
LINC00479Q96M42 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00479Q96M42 AL662844.4-201ENST00000606367 2838 ntBASIC13.44□□□□□ -0.26
LINC00479Q96M42 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC13.44□□□□□ -0.26
LINC00479Q96M42 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
LINC00479Q96M42 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00479Q96M42 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC13.44□□□□□ -0.26
LINC00479Q96M42 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC13.44□□□□□ -0.26
LINC00479Q96M42 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC13.44□□□□□ -0.26
LINC00479Q96M42 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC13.44□□□□□ -0.26
LINC00479Q96M42 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC13.44□□□□□ -0.26
LINC00479Q96M42 AC116562.2-201ENST00000507042 360 ntBASIC13.44□□□□□ -0.26
LINC00479Q96M42 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC13.44□□□□□ -0.26
LINC00479Q96M42 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms