Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC13.17□□□□□ -0.3
NUP35Q8NFH5 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
NUP35Q8NFH5 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NUP35Q8NFH5 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
NUP35Q8NFH5 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
NUP35Q8NFH5 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC13.17□□□□□ -0.3
NUP35Q8NFH5 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NUP35Q8NFH5 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC13.17□□□□□ -0.3
NUP35Q8NFH5 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC13.17□□□□□ -0.3
NUP35Q8NFH5 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NUP35Q8NFH5 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC13.17□□□□□ -0.3
NUP35Q8NFH5 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
NUP35Q8NFH5 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NUP35Q8NFH5 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NUP35Q8NFH5 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
NUP35Q8NFH5 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC13.17□□□□□ -0.3
NUP35Q8NFH5 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NUP35Q8NFH5 AL162430.1-201ENST00000480705 870 ntBASIC13.17□□□□□ -0.3
NUP35Q8NFH5 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC13.17□□□□□ -0.3
NUP35Q8NFH5 TK2-208ENST00000545043 1120 ntTSL 2 BASIC13.17□□□□□ -0.3
NUP35Q8NFH5 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
NUP35Q8NFH5 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
NUP35Q8NFH5 AC011298.2-201ENST00000617989 482 ntBASIC13.17□□□□□ -0.3
NUP35Q8NFH5 ANKRD20A6P-201ENST00000618763 204 ntBASIC13.17□□□□□ -0.3
NUP35Q8NFH5 AC078925.2-201ENST00000624013 1973 ntBASIC13.17□□□□□ -0.3
NUP35Q8NFH5 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NUP35Q8NFH5 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NUP35Q8NFH5 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
NUP35Q8NFH5 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NUP35Q8NFH5 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
NUP35Q8NFH5 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NUP35Q8NFH5 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NUP35Q8NFH5 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NUP35Q8NFH5 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC13.17□□□□□ -0.3
NUP35Q8NFH5 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
NUP35Q8NFH5 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NUP35Q8NFH5 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
NUP35Q8NFH5 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NUP35Q8NFH5 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NUP35Q8NFH5 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NUP35Q8NFH5 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NUP35Q8NFH5 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
NUP35Q8NFH5 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NUP35Q8NFH5 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NUP35Q8NFH5 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
NUP35Q8NFH5 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NUP35Q8NFH5 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NUP35Q8NFH5 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NUP35Q8NFH5 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NUP35Q8NFH5 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC13.16□□□□□ -0.3
NUP35Q8NFH5 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NUP35Q8NFH5 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NUP35Q8NFH5 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
NUP35Q8NFH5 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC13.16□□□□□ -0.3
NUP35Q8NFH5 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NUP35Q8NFH5 AC046185.3-201ENST00000623228 1824 ntBASIC13.16□□□□□ -0.3
NUP35Q8NFH5 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NUP35Q8NFH5 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NUP35Q8NFH5 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
NUP35Q8NFH5 PAUPAR-201ENST00000630360 2965 ntBASIC13.16□□□□□ -0.3
NUP35Q8NFH5 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NUP35Q8NFH5 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
NUP35Q8NFH5 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC13.16□□□□□ -0.3
NUP35Q8NFH5 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NUP35Q8NFH5 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
NUP35Q8NFH5 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
NUP35Q8NFH5 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NUP35Q8NFH5 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NUP35Q8NFH5 MIR663A-201ENST00000385250 93 ntBASIC13.16□□□□□ -0.3
NUP35Q8NFH5 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC13.16□□□□□ -0.3
NUP35Q8NFH5 PPP1R14BP5-201ENST00000440334 435 ntBASIC13.16□□□□□ -0.3
NUP35Q8NFH5 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC13.16□□□□□ -0.3
NUP35Q8NFH5 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC13.16□□□□□ -0.3
NUP35Q8NFH5 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC13.16□□□□□ -0.3
NUP35Q8NFH5 MIR3180-5-201ENST00000583743 153 ntBASIC13.16□□□□□ -0.3
NUP35Q8NFH5 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC13.16□□□□□ -0.3
NUP35Q8NFH5 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC13.16□□□□□ -0.3
NUP35Q8NFH5 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NUP35Q8NFH5 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC13.16□□□□□ -0.3
NUP35Q8NFH5 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NUP35Q8NFH5 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NUP35Q8NFH5 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NUP35Q8NFH5 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NUP35Q8NFH5 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NUP35Q8NFH5 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NUP35Q8NFH5 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NUP35Q8NFH5 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC13.16□□□□□ -0.3
NUP35Q8NFH5 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NUP35Q8NFH5 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC13.16□□□□□ -0.3
NUP35Q8NFH5 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
NUP35Q8NFH5 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NUP35Q8NFH5 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NUP35Q8NFH5 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC13.16□□□□□ -0.3
NUP35Q8NFH5 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NUP35Q8NFH5 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NUP35Q8NFH5 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NUP35Q8NFH5 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
NUP35Q8NFH5 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC13.16□□□□□ -0.3
NUP35Q8NFH5 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NUP35Q8NFH5 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 455.3 ms