Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDH20Q8N6Y1 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDH20Q8N6Y1 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDH20Q8N6Y1 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDH20Q8N6Y1 ABCD1P5-201ENST00000445663 754 ntBASIC17.98■□□□□ 0.47
PCDH20Q8N6Y1 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.98■□□□□ 0.47
PCDH20Q8N6Y1 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.98■□□□□ 0.47
PCDH20Q8N6Y1 AC106795.1-205ENST00000512851 1056 ntBASIC17.98■□□□□ 0.47
PCDH20Q8N6Y1 AF238378.1-201ENST00000526806 358 ntBASIC17.98■□□□□ 0.47
PCDH20Q8N6Y1 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDH20Q8N6Y1 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDH20Q8N6Y1 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.98■□□□□ 0.47
PCDH20Q8N6Y1 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDH20Q8N6Y1 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.98■□□□□ 0.47
PCDH20Q8N6Y1 AL031008.1-201ENST00000619963 541 ntBASIC17.98■□□□□ 0.47
PCDH20Q8N6Y1 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDH20Q8N6Y1 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDH20Q8N6Y1 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDH20Q8N6Y1 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PCDH20Q8N6Y1 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDH20Q8N6Y1 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDH20Q8N6Y1 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDH20Q8N6Y1 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDH20Q8N6Y1 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
PCDH20Q8N6Y1 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDH20Q8N6Y1 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDH20Q8N6Y1 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
PCDH20Q8N6Y1 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
PCDH20Q8N6Y1 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDH20Q8N6Y1 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.97■□□□□ 0.47
PCDH20Q8N6Y1 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDH20Q8N6Y1 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDH20Q8N6Y1 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDH20Q8N6Y1 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDH20Q8N6Y1 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDH20Q8N6Y1 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
PCDH20Q8N6Y1 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDH20Q8N6Y1 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDH20Q8N6Y1 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDH20Q8N6Y1 AC134043.2-201ENST00000624206 2238 ntBASIC17.97■□□□□ 0.47
PCDH20Q8N6Y1 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDH20Q8N6Y1 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDH20Q8N6Y1 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDH20Q8N6Y1 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDH20Q8N6Y1 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.97■□□□□ 0.47
PCDH20Q8N6Y1 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.97■□□□□ 0.47
PCDH20Q8N6Y1 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDH20Q8N6Y1 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDH20Q8N6Y1 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDH20Q8N6Y1 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDH20Q8N6Y1 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDH20Q8N6Y1 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDH20Q8N6Y1 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDH20Q8N6Y1 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDH20Q8N6Y1 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
PCDH20Q8N6Y1 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDH20Q8N6Y1 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDH20Q8N6Y1 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDH20Q8N6Y1 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDH20Q8N6Y1 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDH20Q8N6Y1 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
PCDH20Q8N6Y1 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDH20Q8N6Y1 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.96■□□□□ 0.47
PCDH20Q8N6Y1 AC026396.1-201ENST00000419388 421 ntBASIC17.96■□□□□ 0.47
PCDH20Q8N6Y1 AC103564.2-201ENST00000432853 1299 ntBASIC17.96■□□□□ 0.47
PCDH20Q8N6Y1 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDH20Q8N6Y1 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDH20Q8N6Y1 AC079781.3-201ENST00000449110 356 ntBASIC17.96■□□□□ 0.47
PCDH20Q8N6Y1 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDH20Q8N6Y1 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.96■□□□□ 0.47
PCDH20Q8N6Y1 AC104692.2-201ENST00000603054 253 ntBASIC17.96■□□□□ 0.47
PCDH20Q8N6Y1 AC008608.2-201ENST00000606089 416 ntBASIC17.96■□□□□ 0.47
PCDH20Q8N6Y1 AP001269.4-201ENST00000609611 512 ntBASIC17.96■□□□□ 0.47
PCDH20Q8N6Y1 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.96■□□□□ 0.47
PCDH20Q8N6Y1 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDH20Q8N6Y1 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
PCDH20Q8N6Y1 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDH20Q8N6Y1 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDH20Q8N6Y1 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDH20Q8N6Y1 BX276092.7-203ENST00000637198 1536 ntBASIC17.96■□□□□ 0.47
PCDH20Q8N6Y1 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDH20Q8N6Y1 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDH20Q8N6Y1 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDH20Q8N6Y1 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDH20Q8N6Y1 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
PCDH20Q8N6Y1 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.46
PCDH20Q8N6Y1 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.46
PCDH20Q8N6Y1 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
PCDH20Q8N6Y1 AC009949.1-201ENST00000623048 1830 ntBASIC17.95■□□□□ 0.46
PCDH20Q8N6Y1 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDH20Q8N6Y1 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDH20Q8N6Y1 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
PCDH20Q8N6Y1 LINC00896-202ENST00000609602 2128 ntBASIC17.95■□□□□ 0.46
PCDH20Q8N6Y1 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDH20Q8N6Y1 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDH20Q8N6Y1 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
PCDH20Q8N6Y1 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDH20Q8N6Y1 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDH20Q8N6Y1 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.95■□□□□ 0.46
PCDH20Q8N6Y1 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms