Protein–RNA interactions for Protein: Q6IQ49

SDE2, Protein SDE2 homolog, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2Q6IQ49 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SDE2Q6IQ49 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SDE2Q6IQ49 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
SDE2Q6IQ49 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SDE2Q6IQ49 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.8■□□□□ 0.44
SDE2Q6IQ49 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.8■□□□□ 0.44
SDE2Q6IQ49 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
SDE2Q6IQ49 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.8■□□□□ 0.44
SDE2Q6IQ49 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SDE2Q6IQ49 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SDE2Q6IQ49 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.8■□□□□ 0.44
SDE2Q6IQ49 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SDE2Q6IQ49 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SDE2Q6IQ49 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.8■□□□□ 0.44
SDE2Q6IQ49 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.8■□□□□ 0.44
SDE2Q6IQ49 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SDE2Q6IQ49 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.8■□□□□ 0.44
SDE2Q6IQ49 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.8■□□□□ 0.44
SDE2Q6IQ49 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.8■□□□□ 0.44
SDE2Q6IQ49 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
SDE2Q6IQ49 AC109462.3-201ENST00000573934 613 ntBASIC17.8■□□□□ 0.44
SDE2Q6IQ49 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.8■□□□□ 0.44
SDE2Q6IQ49 AC010327.4-202ENST00000591484 748 ntBASIC17.8■□□□□ 0.44
SDE2Q6IQ49 AC004706.3-202ENST00000621574 984 ntBASIC17.8■□□□□ 0.44
SDE2Q6IQ49 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.8■□□□□ 0.44
SDE2Q6IQ49 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SDE2Q6IQ49 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SDE2Q6IQ49 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.8■□□□□ 0.44
SDE2Q6IQ49 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SDE2Q6IQ49 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SDE2Q6IQ49 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.8■□□□□ 0.44
SDE2Q6IQ49 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SDE2Q6IQ49 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SDE2Q6IQ49 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SDE2Q6IQ49 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.79■□□□□ 0.44
SDE2Q6IQ49 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.79■□□□□ 0.44
SDE2Q6IQ49 AC132938.5-201ENST00000624980 1813 ntBASIC17.79■□□□□ 0.44
SDE2Q6IQ49 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SDE2Q6IQ49 WIZP1-201ENST00000531444 2299 ntBASIC17.79■□□□□ 0.44
SDE2Q6IQ49 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SDE2Q6IQ49 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SDE2Q6IQ49 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SDE2Q6IQ49 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.79■□□□□ 0.44
SDE2Q6IQ49 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SDE2Q6IQ49 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
SDE2Q6IQ49 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.79■□□□□ 0.44
SDE2Q6IQ49 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SDE2Q6IQ49 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SDE2Q6IQ49 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.79■□□□□ 0.44
SDE2Q6IQ49 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SDE2Q6IQ49 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SDE2Q6IQ49 YBX2P1-201ENST00000394192 760 ntBASIC17.79■□□□□ 0.44
SDE2Q6IQ49 CRYGEP-201ENST00000412192 528 ntBASIC17.79■□□□□ 0.44
SDE2Q6IQ49 DDX43P3-201ENST00000441064 443 ntBASIC17.79■□□□□ 0.44
SDE2Q6IQ49 STK19B-204ENST00000512515 211 ntBASIC17.79■□□□□ 0.44
SDE2Q6IQ49 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.79■□□□□ 0.44
SDE2Q6IQ49 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.79■□□□□ 0.44
SDE2Q6IQ49 MTDHP5-201ENST00000598980 586 ntBASIC17.79■□□□□ 0.44
SDE2Q6IQ49 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.79■□□□□ 0.44
SDE2Q6IQ49 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SDE2Q6IQ49 AC093677.2-201ENST00000600169 1863 ntBASIC17.79■□□□□ 0.44
SDE2Q6IQ49 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
SDE2Q6IQ49 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.79■□□□□ 0.44
SDE2Q6IQ49 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SDE2Q6IQ49 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SDE2Q6IQ49 AP000974.1-201ENST00000623909 2387 ntBASIC17.79■□□□□ 0.44
SDE2Q6IQ49 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SDE2Q6IQ49 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SDE2Q6IQ49 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.79■□□□□ 0.44
SDE2Q6IQ49 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SDE2Q6IQ49 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.78■□□□□ 0.44
SDE2Q6IQ49 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SDE2Q6IQ49 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SDE2Q6IQ49 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SDE2Q6IQ49 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
SDE2Q6IQ49 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.78■□□□□ 0.44
SDE2Q6IQ49 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SDE2Q6IQ49 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SDE2Q6IQ49 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SDE2Q6IQ49 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SDE2Q6IQ49 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.78■□□□□ 0.44
SDE2Q6IQ49 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.78■□□□□ 0.44
SDE2Q6IQ49 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
SDE2Q6IQ49 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
SDE2Q6IQ49 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.78■□□□□ 0.44
SDE2Q6IQ49 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.78■□□□□ 0.44
SDE2Q6IQ49 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.78■□□□□ 0.44
SDE2Q6IQ49 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SDE2Q6IQ49 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.78■□□□□ 0.44
SDE2Q6IQ49 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SDE2Q6IQ49 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.78■□□□□ 0.44
SDE2Q6IQ49 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.78■□□□□ 0.44
SDE2Q6IQ49 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.78■□□□□ 0.44
SDE2Q6IQ49 AL139424.1-201ENST00000607572 797 ntBASIC17.78■□□□□ 0.44
SDE2Q6IQ49 AC064836.3-201ENST00000607928 673 ntBASIC17.78■□□□□ 0.44
SDE2Q6IQ49 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.78■□□□□ 0.44
SDE2Q6IQ49 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.78■□□□□ 0.44
SDE2Q6IQ49 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
SDE2Q6IQ49 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SDE2Q6IQ49 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms