Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00242Q5T6M2 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC12.05□□□□□ -0.48
LINC00242Q5T6M2 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00242Q5T6M2 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00242Q5T6M2 AC005915.1-201ENST00000624912 2018 ntBASIC12.04□□□□□ -0.48
LINC00242Q5T6M2 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00242Q5T6M2 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00242Q5T6M2 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00242Q5T6M2 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00242Q5T6M2 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
LINC00242Q5T6M2 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00242Q5T6M2 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00242Q5T6M2 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00242Q5T6M2 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
LINC00242Q5T6M2 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
LINC00242Q5T6M2 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00242Q5T6M2 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC12.04□□□□□ -0.48
LINC00242Q5T6M2 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC12.04□□□□□ -0.48
LINC00242Q5T6M2 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC12.04□□□□□ -0.48
LINC00242Q5T6M2 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC12.04□□□□□ -0.48
LINC00242Q5T6M2 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC12.04□□□□□ -0.48
LINC00242Q5T6M2 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC12.04□□□□□ -0.48
LINC00242Q5T6M2 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00242Q5T6M2 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC12.04□□□□□ -0.48
LINC00242Q5T6M2 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC12.04□□□□□ -0.48
LINC00242Q5T6M2 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00242Q5T6M2 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00242Q5T6M2 BX276092.7-203ENST00000637198 1536 ntBASIC12.04□□□□□ -0.48
LINC00242Q5T6M2 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC12.04□□□□□ -0.48
LINC00242Q5T6M2 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00242Q5T6M2 DOC2GP-204ENST00000639052 2548 ntBASIC12.04□□□□□ -0.48
LINC00242Q5T6M2 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00242Q5T6M2 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00242Q5T6M2 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00242Q5T6M2 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC12.04□□□□□ -0.48
LINC00242Q5T6M2 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00242Q5T6M2 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00242Q5T6M2 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00242Q5T6M2 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
LINC00242Q5T6M2 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00242Q5T6M2 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00242Q5T6M2 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00242Q5T6M2 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00242Q5T6M2 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC12.04□□□□□ -0.48
LINC00242Q5T6M2 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00242Q5T6M2 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00242Q5T6M2 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00242Q5T6M2 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00242Q5T6M2 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00242Q5T6M2 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00242Q5T6M2 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC12.03□□□□□ -0.48
LINC00242Q5T6M2 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00242Q5T6M2 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
LINC00242Q5T6M2 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00242Q5T6M2 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00242Q5T6M2 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
LINC00242Q5T6M2 LINC01311-201ENST00000565162 1445 ntBASIC12.03□□□□□ -0.48
LINC00242Q5T6M2 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00242Q5T6M2 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
LINC00242Q5T6M2 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00242Q5T6M2 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
LINC00242Q5T6M2 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00242Q5T6M2 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC12.03□□□□□ -0.48
LINC00242Q5T6M2 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
LINC00242Q5T6M2 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
LINC00242Q5T6M2 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00242Q5T6M2 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
LINC00242Q5T6M2 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00242Q5T6M2 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC12.03□□□□□ -0.48
LINC00242Q5T6M2 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC12.03□□□□□ -0.48
LINC00242Q5T6M2 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
LINC00242Q5T6M2 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC12.03□□□□□ -0.48
LINC00242Q5T6M2 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00242Q5T6M2 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00242Q5T6M2 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC12.03□□□□□ -0.48
LINC00242Q5T6M2 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00242Q5T6M2 GAD2-202ENST00000376248 680 ntTSL 5 BASIC12.03□□□□□ -0.48
LINC00242Q5T6M2 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
LINC00242Q5T6M2 AC005104.2-201ENST00000427818 678 ntBASIC12.03□□□□□ -0.48
LINC00242Q5T6M2 RBM17P1-201ENST00000453646 1190 ntBASIC12.03□□□□□ -0.48
LINC00242Q5T6M2 REXO2-216ENST00000544196 452 ntTSL 3 BASIC12.03□□□□□ -0.48
LINC00242Q5T6M2 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC12.03□□□□□ -0.48
LINC00242Q5T6M2 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00242Q5T6M2 AP003071.4-201ENST00000562276 1284 ntBASIC12.03□□□□□ -0.48
LINC00242Q5T6M2 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC12.03□□□□□ -0.48
LINC00242Q5T6M2 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00242Q5T6M2 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00242Q5T6M2 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00242Q5T6M2 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC12.03□□□□□ -0.48
LINC00242Q5T6M2 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
LINC00242Q5T6M2 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00242Q5T6M2 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC12.03□□□□□ -0.48
LINC00242Q5T6M2 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00242Q5T6M2 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
LINC00242Q5T6M2 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC12.03□□□□□ -0.48
LINC00242Q5T6M2 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
LINC00242Q5T6M2 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC12.03□□□□□ -0.48
LINC00242Q5T6M2 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC12.03□□□□□ -0.48
LINC00242Q5T6M2 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00242Q5T6M2 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms