Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.4■□□□□ 0.54
CBX1P83916 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CBX1P83916 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CBX1P83916 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.4■□□□□ 0.54
CBX1P83916 AC091305.1-201ENST00000479476 895 ntBASIC18.4■□□□□ 0.54
CBX1P83916 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.4■□□□□ 0.54
CBX1P83916 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CBX1P83916 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC18.4■□□□□ 0.54
CBX1P83916 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CBX1P83916 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC18.4■□□□□ 0.54
CBX1P83916 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CBX1P83916 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CBX1P83916 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.4■□□□□ 0.54
CBX1P83916 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CBX1P83916 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CBX1P83916 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CBX1P83916 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CBX1P83916 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CBX1P83916 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CBX1P83916 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC18.39■□□□□ 0.54
CBX1P83916 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
CBX1P83916 AC013268.4-201ENST00000637413 2228 ntBASIC18.39■□□□□ 0.54
CBX1P83916 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CBX1P83916 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CBX1P83916 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CBX1P83916 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
CBX1P83916 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.39■□□□□ 0.54
CBX1P83916 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CBX1P83916 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CBX1P83916 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CBX1P83916 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CBX1P83916 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CBX1P83916 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CBX1P83916 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.39■□□□□ 0.53
CBX1P83916 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CBX1P83916 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.39■□□□□ 0.53
CBX1P83916 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC18.39■□□□□ 0.53
CBX1P83916 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CBX1P83916 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CBX1P83916 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CBX1P83916 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
CBX1P83916 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.39■□□□□ 0.53
CBX1P83916 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.39■□□□□ 0.53
CBX1P83916 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.39■□□□□ 0.53
CBX1P83916 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.39■□□□□ 0.53
CBX1P83916 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CBX1P83916 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CBX1P83916 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CBX1P83916 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CBX1P83916 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CBX1P83916 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CBX1P83916 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CBX1P83916 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CBX1P83916 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CBX1P83916 AC023908.3-201ENST00000564211 3047 ntBASIC18.38■□□□□ 0.53
CBX1P83916 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC18.38■□□□□ 0.53
CBX1P83916 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CBX1P83916 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CBX1P83916 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.38■□□□□ 0.53
CBX1P83916 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.38■□□□□ 0.53
CBX1P83916 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.38■□□□□ 0.53
CBX1P83916 AC106739.1-201ENST00000617035 715 ntBASIC18.38■□□□□ 0.53
CBX1P83916 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.38■□□□□ 0.53
CBX1P83916 AC092437.1-201ENST00000624794 1048 ntBASIC18.38■□□□□ 0.53
CBX1P83916 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CBX1P83916 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.38■□□□□ 0.53
CBX1P83916 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CBX1P83916 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CBX1P83916 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CBX1P83916 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CBX1P83916 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CBX1P83916 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.38■□□□□ 0.53
CBX1P83916 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.38■□□□□ 0.53
CBX1P83916 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
CBX1P83916 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CBX1P83916 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.38■□□□□ 0.53
CBX1P83916 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CBX1P83916 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.38■□□□□ 0.53
CBX1P83916 GPAT2P1-201ENST00000444924 1672 ntBASIC18.38■□□□□ 0.53
CBX1P83916 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CBX1P83916 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CBX1P83916 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CBX1P83916 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CBX1P83916 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CBX1P83916 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CBX1P83916 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CBX1P83916 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
CBX1P83916 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.37■□□□□ 0.53
CBX1P83916 AC026748.1-201ENST00000624349 3251 ntBASIC18.37■□□□□ 0.53
CBX1P83916 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC18.37■□□□□ 0.53
CBX1P83916 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CBX1P83916 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC18.37■□□□□ 0.53
CBX1P83916 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.37■□□□□ 0.53
CBX1P83916 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CBX1P83916 MCRIP2P1-201ENST00000394346 511 ntBASIC18.37■□□□□ 0.53
CBX1P83916 AC096631.2-201ENST00000436136 790 ntBASIC18.37■□□□□ 0.53
CBX1P83916 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CBX1P83916 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.37■□□□□ 0.53
CBX1P83916 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.37■□□□□ 0.53
CBX1P83916 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms